Phosphoglycerate Kinase, Testis Specific

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-189   LYS-190  7.8 8.1 5.1 -9.0 70.9 77.4 5.4
 LYS-190   LYS-191  9.4 9.2 -11.0 10.6 76.4 62.8 -10.1
 LYS-191   GLU-192  7.2 7.5 -6.6 -6.2 124.0 111.3 -20.4
 GLU-192   LEU-193  4.0 4.0 -0.8 2.9 150.7 153.8 15.9
 LEU-193   ASP-194  5.9 4.9 3.7 -10.4 94.0 91.2 18.7
 ASP-194   TYR-195  8.6 7.9 3.5 15.2 88.3 111.3 -17.3
 TYR-195   PHE-196  7.2 6.5 -8.2 6.2 144.3 133.0 7.1
 PHE-196   SER-197  5.1 4.9 -17.5 16.6 142.9 140.3 -4.1
 SER-197   LYS-198  7.6 7.2 -11.9 -0.8 89.8 77.2 5.3
 LYS-198   ALA-199  10.2 10.1 -0.4 5.9 113.5 86.6 -7.8
 ALA-199   LEU-200  9.2 9.3 -37.0 37.9 165.1 147.8 15.1
 LEU-200   GLU-201  8.2 8.6 34.3 10.1 52.6 44.2 100.4
 GLU-201   LYS-202  10.3 11.1 4.6 7.6 84.9 78.4 -1.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   GLY-212  14.9 15.2 -7.8 -9.2 110.6 112.5 -30.0
 GLY-212   GLY-213  16.6 17.2 47.3 -59.6 103.7 91.4 -7.2
 GLY-213   ALA-214  17.7 17.3 20.4 -41.5 103.8 116.9 15.1
 ALA-214   LYS-215  20.8 19.7 61.2 11.1 164.4 146.8 -213.6
 LYS-215   VAL-216  20.9 18.0 -86.5 17.9 56.0 37.5 144.0
 VAL-216   LYS-217  19.8 19.6 -8.7 -3.7 45.7 21.9 15.1
 LYS-217   ASP-218  19.2 19.9 -11.6 28.4 98.9 73.4 -2.5
 ASP-218   LYS-219  16.2 16.2 -75.3 44.2 108.2 88.9 38.4
 LYS-219   ILE-220  14.4 14.7 -26.4 -3.8 38.4 58.4 104.2
 ILE-220   GLN-221  14.6 17.1 19.1 -13.8 99.7 149.4 -14.0
 GLN-221   LEU-222  10.8 14.9 44.2 -34.0 46.1 86.1 12.6
 LEU-222   ILE-223  10.3 11.9 28.8 -5.5 94.9 95.3 -14.5
 ILE-223   LYS-224  13.5 14.1 11.1 11.4 138.9 146.5 -61.4
 LYS-224   ASN-225  12.6 13.9 -8.3 -7.1 95.6 88.3 3.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-391   SER-392  3.0 3.3 14.3 -54.1 119.4 123.9 68.4
 SER-392   THR-393  1.7 2.1 13.3 11.6 61.4 83.9 25.6
 THR-393   GLY-394  3.9 5.0 -14.4 47.2 53.7 30.8 -71.8
 GLY-394   GLY-395  6.0 5.4 26.6 -50.8 125.2 95.7 20.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees