Putative Phosphonate Binding Protein For Abc Transporter

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-90   LYS-91  10.2 10.2 -0.5 -0.1 48.3 49.4 128.9
 LYS-91   SER-92  11.0 10.9 2.4 0.2 148.4 148.1 -54.8
 SER-92   VAL-93  9.6 9.6 -3.0 2.4 52.0 53.4 60.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-118   PHE-119  7.5 7.6 -2.7 4.9 33.9 35.4 -84.4
 PHE-119   THR-120  6.7 6.7 -0.5 0.0 67.6 67.0 102.4
 THR-120   PHE-121  3.4 3.4 -3.0 1.5 19.4 19.4 -29.6
 PHE-121   GLY-122  2.6 2.7 4.4 -2.9 91.4 91.2 -28.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-124   ASN-125  5.3 5.4 -3.5 1.1 8.3 8.2 66.3
 ASN-125   SER-126  4.8 4.9 -0.1 -0.4 71.6 70.7 -15.8
 SER-126   THR-127  1.2 1.2 5.5 -7.4 117.7 117.6 13.8
 THR-127   SER-128  1.6 1.6 2.4 -0.7 57.3 58.2 27.9
 SER-128   GLY-129  4.5 4.5 -3.7 -0.3 170.1 169.9 -131.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-153   PHE-154  4.1 4.2 0.4 -2.2 160.5 161.1 50.5
 PHE-154   SER-155  3.4 3.5 -2.7 1.3 106.2 106.0 25.4
 SER-155   GLY-156  3.2 3.1 0.6 -2.4 124.8 124.3 137.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-161   ILE-162  4.8 4.8 -0.6 -0.4 58.5 58.4 58.8
 ILE-162   ALA-163  8.4 8.3 -1.0 2.8 20.0 19.5 -26.7
 ALA-163   LEU-164  8.4 8.3 -3.6 2.9 50.4 51.5 57.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-168   ALA-169  6.4 6.3 -0.6 -2.8 91.9 91.6 -29.2
 ALA-169   PHE-170  2.7 2.5 4.6 -2.8 121.3 122.4 -6.7
 PHE-170   ASP-171  4.3 4.3 3.6 1.1 87.6 87.2 -25.3
 ASP-171   ALA-172  8.1 8.1 -0.9 -1.9 28.5 28.5 101.7
 ALA-172   GLY-173  8.5 8.5 -1.1 3.4 50.4 49.7 -128.5
 GLY-173   ALA-174  6.6 6.6 -1.8 1.8 27.7 26.3 67.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-182   ASN-183  17.2 17.0 -12.8 -4.9 167.1 164.8 -574.9
 ASN-183   LEU-184  16.2 16.4 -0.8 9.5 120.2 120.3 223.1
 LEU-184   LYS-185  18.2 18.1 -21.1 21.5 88.3 89.5 26.8
 LYS-185   ASN-186  21.3 21.4 -10.7 21.7 108.3 109.9 -11.8
 ASN-186   ASN-187  21.3 21.4 -44.2 27.8 145.0 155.6 -422.5
 ASN-187   PRO-188  19.1 19.5 8.1 -11.3 54.2 49.9 -33.6
 PRO-188   LYS-189  19.4 19.2 12.2 5.3 27.2 26.2 465.4
 LYS-189   ARG-190  18.1 18.0 2.0 -3.6 95.4 95.1 -29.1
 ARG-190   THR-191  14.7 14.6 -7.5 7.4 81.4 85.4 91.3
 THR-191   SER-192  14.8 14.7 0.1 7.6 48.1 44.8 238.9
 SER-192   ASN-193  16.7 16.4 -11.4 5.3 110.5 107.1 -179.1
 ASN-193   LEU-194  14.3 14.2 -1.5 3.6 47.0 45.3 -7.3
 LEU-194   GLU-195  13.9 13.9 -7.6 8.3 62.8 64.3 53.4
 GLU-195   LEU-196  16.1 16.2 3.0 4.8 146.9 143.8 -284.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-201   GLU-202  14.4 14.4 2.2 2.6 112.6 110.6 114.7
 GLU-202   TYR-203  12.3 12.3 -1.0 3.0 67.0 66.7 -50.1
 TYR-203   VAL-204  8.9 8.8 0.2 1.4 110.0 108.5 2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees