Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-167   LYS-168  6.8 7.4 47.5 -14.7 94.4 69.2 -42.6
 LYS-168   MET-169  5.4 4.8 8.4 -46.0 132.0 138.2 193.6
 MET-169   LYS-170  2.4 3.4 77.8 -31.2 159.4 144.8 -314.1
 LYS-170   TYR-171  4.6 6.6 44.5 -25.6 93.2 91.1 -51.6
 TYR-171   LEU-172  7.6 7.6 23.2 -26.7 95.4 129.5 -25.3
 LEU-172   PHE-173  6.4 5.6 16.1 13.0 155.6 160.2 -210.2
 PHE-173   ASP-174  4.7 5.4 -7.4 -13.2 35.4 71.6 111.0
 ASP-174   ASN-175  5.6 9.2 85.5 -2.8 92.6 76.1 169.5
 ASN-175   ARG-176  9.3 9.9 -157.5 26.1 96.9 40.4 336.1
 ARG-176   TYR-177  10.2 12.9 53.1 -25.5 129.0 131.1 -165.3
 TYR-177   GLY-178  9.5 11.0 29.2 -28.2 161.2 115.9 -28.9
 GLY-178   THR-179  7.4 7.9 -33.6 -2.1 51.9 45.9 157.5
 THR-179   GLY-180  9.8 9.5 -16.2 14.4 89.9 74.1 37.1
 GLY-180   GLN-181  12.4 12.8 -5.2 -1.1 44.5 37.1 49.2
 GLN-181   SER-182  11.9 12.6 22.8 -18.5 155.5 148.8 -54.1
 SER-182   THR-183  9.9 10.0 1.7 1.3 114.3 115.3 -24.0
 THR-183   TRP-184  12.9 12.7 -2.2 4.8 65.2 61.2 -19.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-335   GLY-336  5.0 5.0 -8.9 7.4 38.1 35.2 -4.4
 GLY-336   HIS-337  5.1 5.1 58.0 -69.2 137.5 150.8 105.6
 HIS-337   PRO-338  4.6 4.6 -6.5 0.6 99.4 95.5 30.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees