D-Mandelate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-56
LYS-57
9.6
9.7
-22.6
21.5
95.6
94.6
-693.1
LYS-57
LEU-58
8.0
8.2
20.7
-11.2
29.8
27.0
658.5
LEU-58
ALA-59
5.1
5.3
3.9
-7.5
45.4
40.9
48.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-60
GLU-61
9.4
9.6
2.2
-12.6
46.4
43.2
-563.4
GLU-61
ASN-62
9.9
10.1
0.0
21.2
21.6
30.1
1049.2
ASN-62
GLY-63
7.7
7.6
3.0
-4.8
54.1
52.4
-33.3
GLY-63
THR-64
9.5
9.2
-16.5
7.5
88.2
92.7
-89.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-84
ALA-85
15.5
15.7
0.9
-2.8
15.5
18.1
-69.2
ALA-85
ALA-86
13.4
13.4
-5.8
0.5
95.6
94.2
-104.9
ALA-86
ALA-87
11.3
11.4
3.8
-3.1
22.4
18.7
-52.1
ALA-87
GLY-88
9.0
9.3
-4.7
22.2
115.2
110.1
669.0
GLY-88
ALA-89
10.8
11.5
-1.7
-2.1
111.9
122.5
-646.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-109
ARG-110
12.0
11.9
-10.0
2.3
164.3
167.8
-318.9
ARG-110
GLY-111
14.0
13.8
0.5
4.1
50.4
55.5
163.5
GLY-111
ALA-112
12.3
12.2
-0.9
-1.4
88.2
88.0
214.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-314
GLU-315
3.4
3.2
1.7
-3.9
86.7
88.8
-247.4
GLU-315
PHE-316
6.3
6.0
4.0
1.9
41.0
44.3
293.8
PHE-316
GLU-317
6.4
6.4
-3.2
1.5
140.4
140.2
-134.8
GLU-317
ARG-318
5.8
5.7
2.8
-0.4
98.0
100.4
5.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees