Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-435   MET-436  6.8 6.8 6.2 -4.6 102.3 106.6 49.5
 MET-436   ALA-437  4.5 4.3 -9.5 10.2 95.5 91.9 -143.4
 ALA-437   ILE-438  6.8 6.6 23.2 -20.3 33.9 27.7 108.2
 ILE-438   GLU-439  8.2 8.2 -2.8 6.8 89.5 92.8 60.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-440   GLN-441  5.2 5.1 -5.6 5.8 23.2 21.9 -58.7
 GLN-441   VAL-442  4.1 4.1 1.3 -4.1 125.7 128.3 168.0
 VAL-442   ALA-443  7.2 7.1 -0.5 0.4 103.7 99.7 -16.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-449   ARG-450  8.5 8.7 17.6 -24.8 79.9 79.6 -45.7
 ARG-450   GLY-451  12.3 12.5 22.9 -34.8 70.8 83.8 98.8
 GLY-451   TYR-452  13.0 12.9 32.5 -16.5 137.3 137.2 -220.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-491   GLU-492  21.5 21.3 -7.9 4.4 137.1 145.7 -105.0
 GLU-492   SER-493  21.7 21.4 20.9 -11.4 76.7 78.9 211.4
 SER-493   ASP-494  18.1 17.7 -14.3 3.5 43.4 52.9 116.7
 ASP-494   ALA-495  17.6 17.3 5.1 3.6 79.5 72.9 -131.4
 ALA-495   LYS-496  20.2 20.1 -7.7 5.7 144.3 141.1 -65.1
 LYS-496   LEU-497  18.7 18.3 -0.4 -0.9 79.0 76.7 -48.2
 LEU-497   LYS-498  15.4 15.2 -10.5 0.3 59.6 67.1 144.3
 LYS-498   GLU-499  17.5 17.2 13.3 -11.1 51.6 50.6 59.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees