Protein (Surface Antigen Psaa)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-185   GLU-186  13.9 13.4 9.3 -2.8 60.9 58.1 52.0
 GLU-186   SER-187  12.9 12.4 -6.6 9.3 65.6 64.6 -44.9
 SER-187   LYS-188  9.9 9.5 -38.2 16.5 29.7 35.6 222.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-206   ALA-207  7.5 7.5 1.9 -8.4 103.9 101.0 23.3
 ALA-207   PHE-208  5.7 6.1 -6.7 -1.1 75.6 67.4 73.2
 PHE-208   LYS-209  2.4 2.8 3.5 -6.0 46.8 51.4 -24.9
 LYS-209   TYR-210  0.4 0.7 15.0 -1.2 74.2 76.9 7.8
 LYS-209   TYR-210  0.4 0.7 15.0 -1.2 74.2 76.9 7.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-209   TYR-210  0.4 0.7 15.0 -1.2 74.2 76.9 7.8
 LYS-209   TYR-210  0.4 0.7 15.0 -1.2 74.2 76.9 7.8
 TYR-210   PHE-211  3.1 2.8 4.7 -0.9 43.0 43.3 -12.2
 PHE-211   SER-212  2.6 2.3 -0.2 -3.2 67.8 63.9 18.3
 SER-212   LYS-213  4.4 4.3 2.5 2.3 64.6 64.3 53.1
 SER-212   LYS-213  4.4 4.3 2.5 2.3 64.6 64.3 53.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 SER-212   LYS-213  4.4 4.3 2.5 2.3 64.6 64.3 53.1
 SER-212   LYS-213  4.4 4.3 2.5 2.3 64.6 64.3 53.1
 LYS-213   ALA-214  6.0 5.6 -4.0 -0.9 49.7 52.2 3.0
 ALA-214   TYR-215  7.6 7.6 1.5 6.8 125.1 122.2 -43.9
 TYR-215   GLY-216  8.0 8.1 -11.7 5.1 113.5 117.3 -23.4
 GLY-216   VAL-217  9.5 9.5 -3.5 10.2 79.4 78.5 71.4
 VAL-217   PRO-218  8.5 8.6 -13.2 -1.2 130.4 133.9 -65.1
 PRO-218   SER-219  8.1 8.1 -4.9 40.7 62.3 69.4 -57.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 TYR-221   ILE-222  11.0 11.2 -8.9 7.5 111.7 118.1 -65.4
 ILE-222   TRP-223  14.3 14.4 9.7 -13.6 43.7 41.8 -55.9
 TRP-223   GLU-224  13.4 13.4 4.7 -8.7 89.2 85.7 -91.0
 GLU-224   ILE-225  10.1 10.6 -157.6 88.1 62.4 71.2 316.9
 ILE-225   ASN-226  11.3 10.4 -3.2 113.5 74.2 132.2 148.5
 ASN-226   THR-227  14.5 13.7 69.5 -28.9 52.8 60.6 290.7
 THR-227   GLU-228  16.7 15.4 153.2 10.1 55.6 109.8 -144.5
 GLU-228   GLU-229  16.9 19.2 109.2 -29.6 123.1 128.5 -539.1
 GLU-229   GLU-230  19.4 20.4 -26.8 -39.4 29.1 55.6 580.3
 GLU-230   GLY-231  19.8 18.7 80.2 1.1 107.0 116.9 -402.8
 GLY-231   THR-232  19.3 19.7 -18.3 -3.6 109.9 114.1 -119.3
 THR-232   PRO-233  22.1 22.3 -8.1 3.9 83.7 86.1 10.9
 PRO-233   GLU-234  23.9 24.1 2.8 -4.6 49.6 49.3 -23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLN-276   ILE-277  10.3 10.0 12.6 -13.2 80.8 85.8 -27.3
 ILE-277   PHE-278  7.0 6.9 -26.8 39.6 107.8 109.5 51.0
 PHE-278   THR-279  6.6 6.8 22.2 3.1 24.5 14.2 209.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-296   LYS-297  3.2 3.4 5.2 0.6 57.2 58.3 11.3
 LYS-297   TYR-298  3.2 3.2 1.5 -2.6 80.9 82.8 19.4
 TYR-298   ASN-299  0.6 0.7 1.8 -10.3 143.8 146.1 56.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees