Rcd1 Required For Cell Differentiation1 Homolog

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-55   ASN-56  11.6 11.5 3.7 10.0 158.7 154.9 -124.5
 ASN-56   ILE-57  12.6 12.7 -32.2 11.2 58.7 58.3 120.8
 ILE-57   TYR-58  9.2 9.7 15.1 6.0 71.9 63.9 130.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-66   THR-67  5.7 5.8 -10.9 20.9 140.4 140.0 86.6
 THR-67   ALA-68  3.5 4.0 -8.5 7.7 71.2 72.4 -1.1
 ALA-68   HIS-69  1.9 2.1 -5.3 5.7 77.7 73.5 -17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-107   HIS-108  4.8 4.5 3.4 2.9 96.4 95.7 17.4
 HIS-108   THR-109  8.4 8.1 -2.4 -1.0 21.5 20.2 31.6
 THR-109   VAL-110  8.6 8.1 -0.9 -11.0 75.0 79.7 46.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-124   GLY-125  4.8 5.3 9.7 -7.9 108.9 106.3 -13.9
 GLY-125   VAL-126  7.5 7.9 5.6 -6.4 134.3 134.6 -1.4
 VAL-126   ILE-127  6.4 6.8 -6.2 11.1 24.0 26.0 -40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-131   LYS-132  9.2 9.0 31.7 -1.5 90.2 89.9 -25.8
 LYS-132   THR-133  12.7 12.6 -10.6 -21.0 138.0 152.9 -302.3
 THR-133   ASP-134  13.0 13.3 25.5 -0.5 30.9 36.2 274.2
 ASP-134   GLU-135  12.2 11.2 18.2 2.3 40.3 44.4 166.7
 GLU-135   GLN-136  10.5 9.2 0.0 8.4 71.6 72.3 36.4
 GLN-136   GLU-137  7.9 6.7 -22.7 -0.9 76.4 68.3 84.5
 GLU-137   VAL-138  6.2 4.3 12.3 -1.2 141.7 162.1 -113.1
 VAL-138   ILE-139  5.0 4.4 5.5 -4.3 84.2 94.7 4.3
 ILE-139   ASN-140  5.0 4.8 -9.6 5.1 118.6 108.6 1.2
 ASN-140   PHE-141  2.1 2.4 6.0 -1.3 126.3 128.4 -26.1
 PHE-141   LEU-142  1.0 0.5 -3.1 -1.6 53.0 44.6 32.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees