Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-109   GLY-110  4.9 5.2 3.0 2.0 12.8 9.1 73.9
 GLY-110   ILE-111  4.3 4.5 0.3 -8.0 83.7 86.9 -40.2
 ILE-111   SER-112  5.6 5.8 -5.2 11.2 85.3 86.0 54.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-191   LEU-192  11.2 11.1 -9.6 15.0 123.4 126.9 38.1
 LEU-192   GLU-193  10.0 10.2 5.4 -5.5 75.4 78.4 -5.5
 GLU-193   SER-194  7.4 7.8 -2.9 5.1 124.5 123.7 11.0
 SER-194   THR-195  4.1 4.4 -1.0 -1.6 174.1 175.9 -37.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-214   LEU-215  1.2 1.1 -6.7 6.3 15.8 13.0 29.7
 LEU-215   ASP-216  2.2 2.5 -3.1 -2.4 77.5 78.0 71.3
 ASP-216   SER-217  4.1 4.4 1.3 0.7 33.3 32.0 5.8
 SER-217   LYS-218  6.2 6.5 -2.1 7.6 106.3 100.9 81.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees