Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-86   PRO-87  6.4 6.4 -12.7 8.7 104.5 88.2 -4.1
 PRO-87   GLU-88  2.8 2.7 86.5 -40.8 30.4 37.5 125.1
 GLU-88   ILE-89  3.2 3.4 -17.7 5.2 89.0 87.6 -9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-183   VAL-184  9.0 10.1 -16.9 36.9 125.4 137.8 56.7
 VAL-184   ASP-185  5.9 7.2 58.4 -28.2 39.2 18.8 61.0
 ASP-185   LEU-186  6.1 7.5 -66.9 26.4 122.3 119.4 -54.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees