Udp-N-Acetylglucosamine Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-227   ASN-228  5.7 5.7 2.5 -1.3 26.8 25.9 34.8
 ASN-228   ARG-229  3.5 3.5 -3.0 6.3 85.0 85.2 26.2
 ARG-229   LEU-230  0.6 0.6 -3.1 0.8 94.8 89.4 -45.3
 LEU-230   GLN-231  4.2 4.3 -6.8 9.7 24.5 22.8 -17.3
 GLN-231   LEU-232  5.2 5.2 -12.1 8.1 52.1 55.9 80.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-234   LEU-235  8.4 8.5 0.0 5.3 15.0 13.2 92.6
 LEU-235   GLU-236  7.5 7.3 11.9 -15.0 84.4 83.5 -22.8
 GLU-236   ARG-237  8.4 8.6 6.2 -6.1 90.8 89.5 5.3
 ARG-237   VAL-238  11.7 11.8 5.6 -2.9 33.8 30.7 65.3
 VAL-238   TYR-239  12.1 11.9 -6.9 0.6 136.0 133.9 -94.9
 TYR-239   GLN-240  11.0 11.0 11.4 -9.5 97.0 97.7 53.7
 GLN-240   SER-241  13.8 13.9 4.7 -2.1 78.0 77.1 -96.8
 SER-241   GLU-242  16.2 16.3 4.2 -1.2 14.1 9.9 46.7
 GLU-242   GLN-243  15.6 15.5 -8.9 12.4 117.2 109.6 89.8
 GLN-243   ALA-244  16.2 16.1 -8.8 2.0 74.0 75.7 -31.1
 ALA-244   GLU-245  19.4 19.2 -2.5 -3.5 122.6 121.3 -60.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees