Succinyl-Coa:3-Ketoacid-Coenzyme A Transferase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-157   PRO-158  15.1 14.9 -5.3 5.9 82.8 82.8 -2.9
 PRO-158   THR-159  12.4 12.2 3.6 -5.6 105.9 108.7 -14.2
 THR-159   GLY-160  9.6 9.6 -2.6 -3.8 11.9 12.2 120.8
 GLY-160   TYR-161  7.7 7.6 8.8 -7.0 111.8 114.5 1.1
 TYR-161   GLY-162  9.1 9.2 2.0 -7.9 91.7 93.5 -36.1
 GLY-162   THR-163  7.5 7.7 -2.8 12.9 70.8 76.1 -91.8
 THR-163   LEU-164  4.3 4.4 -0.2 -5.2 25.1 26.2 144.2
 LEU-164   VAL-165  3.6 3.8 9.4 -5.1 90.8 91.5 -63.1
 VAL-165   GLN-166  7.0 7.2 5.7 5.3 108.0 111.3 -156.6
 GLN-166   GLU-167  8.8 9.0 -5.6 22.4 25.9 17.2 -334.3
 GLU-167   GLY-168  7.5 7.1 -14.7 -22.1 38.7 44.0 622.9
 GLY-168   GLY-169  6.4 7.1 14.4 -7.4 100.5 126.0 56.7
 GLY-169   SER-170  3.5 5.0 -1.8 -10.5 118.4 97.1 -9.6
 SER-170   PRO-171  5.3 5.3 11.8 12.6 132.0 120.0 -361.2
 PRO-171   ILE-172  7.5 8.1 -11.2 21.3 99.5 119.9 253.1
 ILE-172   LYS-173  10.9 11.5 -1.7 6.4 57.5 57.3 9.4
 LYS-173   TYR-174  12.1 12.9 -5.6 9.1 62.9 49.1 -89.6
 TYR-174   ASN-175  11.8 12.2 -1.4 -1.9 22.2 38.4 263.3
 ASN-175   LYS-176  12.4 13.5 18.9 -25.9 83.0 88.9 -38.6
 LYS-176   ASP-177  15.7 15.9 25.9 22.4 76.5 103.5 239.6
 ASP-177   GLY-178  14.3 12.9 -44.7 11.4 147.1 142.9 -241.9
 GLY-178   SER-179  12.8 11.6 -12.8 6.6 92.1 87.7 25.7
 SER-179   VAL-180  9.1 8.5 -3.8 -13.7 107.1 122.3 -208.7
 VAL-180   ALA-181  7.6 8.3 -8.0 6.3 38.9 60.8 22.1
 ALA-181   ILE-182  8.9 11.0 12.4 -9.7 71.9 57.9 6.9
 ILE-182   ALA-183  9.1 11.1 11.0 -2.6 28.2 45.5 213.5
 ALA-183   SER-184  6.9 8.6 -5.7 -2.7 109.8 133.3 -136.9
 SER-184   LYS-185  8.4 9.5 -21.8 30.4 75.2 79.8 -62.8
 LYS-185   PRO-186  9.7 11.3 -14.9 -2.7 139.4 139.4 -277.5
 PRO-186   ARG-187  10.3 10.8 17.0 -17.1 63.4 54.5 -89.0
 ARG-187   GLU-188  12.9 13.2 -9.5 -0.8 92.6 93.1 25.0
 GLU-188   VAL-189  16.1 16.0 5.4 9.8 25.0 25.5 249.7
 VAL-189   ARG-190  15.9 15.7 1.5 0.4 75.2 76.5 -86.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-282   SER-283  26.1 26.1 -6.4 2.0 118.7 126.5 20.0
 SER-283   ILE-284  23.5 23.6 -3.5 2.8 167.7 166.2 0.1
 ILE-284   ARG-285  24.9 25.2 4.7 -3.1 51.2 52.9 -7.5
 ASP-299   ASP-300  21.4 22.6 172.3 13.0 55.6 58.3 -1849.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-312   PHE-313  4.3 4.3 -1.1 -1.5 67.7 66.5 -75.5
 PHE-313   GLU-314  1.9 1.9 -7.4 3.5 30.3 30.3 170.0
 GLU-314   ASP-315  0.7 0.7 6.7 -11.2 110.9 110.4 -89.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-319   ASN-320  5.6 5.5 -1.4 -0.4 48.1 47.2 106.5
 ASN-320   LEU-321  6.8 6.7 2.2 -9.4 107.3 105.6 -11.2
 LEU-321   GLY-322  7.1 6.9 -2.8 15.6 30.4 35.9 -59.6
 GLY-322   ILE-323  7.8 8.2 -3.5 13.9 89.7 108.2 46.5
 ILE-323   GLY-324  11.1 11.7 8.3 -24.5 96.5 83.3 -100.3
 GLY-324   ILE-325  12.4 13.1 1.5 15.8 19.9 38.5 252.5
 ILE-325   PRO-326  12.0 11.7 -10.8 -5.8 134.3 125.6 -176.0
 PRO-326   LEU-327  8.8 8.4 -3.7 -15.4 127.2 127.8 -263.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-396   THR-397  2.9 2.8 -9.9 1.2 47.8 48.3 69.5
 THR-397   MET-398  2.4 2.3 -14.8 9.3 85.9 84.6 49.8
 MET-398   LEU-399  3.1 3.0 3.8 -4.4 140.2 136.9 -51.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-413   MET-414  6.2 6.1 -0.5 -5.6 158.5 154.3 -90.1
 MET-414   ILE-415  6.9 6.9 2.3 1.6 75.7 74.7 44.5
 ILE-415   PRO-416  9.4 9.1 13.2 7.0 17.1 15.2 230.5
 PRO-416   GLY-417  8.5 8.5 -12.4 -3.7 115.1 110.7 -99.9
 GLY-417   LYS-418  11.6 11.7 24.7 -10.6 126.9 133.5 -83.3
 VAL-420   LYS-421  10.7 11.9 -23.8 23.0 65.3 53.1 -131.4
 LYS-421   GLY-422  12.3 12.5 -9.5 -18.5 64.1 75.6 97.8
 GLY-422   MET-423  10.0 9.9 5.7 0.2 142.7 149.5 -52.2
 MET-423   GLY-424  7.5 7.7 -3.2 9.1 31.3 28.4 -151.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-434   THR-435  11.0 11.1 -13.8 14.6 112.1 115.2 48.7
 THR-435   LYS-436  7.3 7.3 -13.6 19.3 82.1 79.4 -170.5
 LYS-436   VAL-437  5.0 5.4 -9.2 9.1 56.5 59.8 118.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees