Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-2   LEU-3  9.3 8.1 -2.5 -18.7 95.9 71.1 35.6
 LEU-3   GLN-4  5.7 5.3 -23.4 -2.3 41.7 44.8 75.6
 GLN-4   GLU-5  6.0 5.9 5.0 1.5 149.9 149.2 -21.6
 GLU-5   TYR-6  5.6 5.3 1.2 -7.7 100.1 96.7 20.2
 TYR-6   GLN-7  3.2 3.2 0.8 3.2 60.7 53.9 13.2
 GLN-7   SER-8  0.8 0.8 -3.5 -5.5 65.1 68.5 35.8
 SER-8   LYS-9  3.7 3.2 3.4 -3.8 150.9 150.7 4.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-19   GLN-20  2.3 2.5 -2.2 15.1 116.7 118.7 30.6
 GLN-20   ARG-21  1.3 1.4 -2.3 1.2 54.1 55.6 11.0
 ARG-21   PHE-22  4.6 5.0 -0.4 -1.0 61.0 61.4 4.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-106   GLU-107  7.4 7.5 -8.0 10.1 10.4 7.9 5.7
 GLU-107   ALA-108  6.9 6.8 9.4 -8.3 113.8 106.4 -17.2
 ALA-108   LEU-109  7.3 7.1 -26.7 17.3 38.0 43.3 37.9
 LEU-109   ASP-110  5.0 4.3 -20.4 3.0 56.9 63.0 60.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees