Atp Synthase Beta Chain, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-126   GLN-127  17.9 17.8 14.3 -41.9 41.0 48.3 -168.9
 SER-128   THR-129  16.6 16.7 45.9 -49.8 27.9 72.9 -57.7
 GLU-132   ILE-133  13.8 13.7 36.9 -63.0 89.1 65.2 -35.3
 ILE-133   LEU-134  12.1 12.3 1.9 -14.7 147.9 130.7 55.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-151   LYS-152  5.8 5.8 -14.4 14.7 96.3 99.4 -10.4
 LYS-152   ILE-153  2.9 3.0 -9.1 4.7 31.0 29.3 20.4
 ILE-153   GLY-154  0.1 0.2 -4.4 -6.9 84.0 86.6 20.7
 GLY-154   LEU-155  3.5 3.7 16.1 -11.6 104.3 114.2 -15.9
 LEU-155   PHE-156  6.1 6.2 -5.9 6.2 64.0 66.7 -48.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-172   ASN-173  15.0 15.3 -7.9 12.2 71.6 72.7 30.0
 ASN-173   ILE-174  14.9 15.4 -6.4 1.9 114.6 123.6 -38.9
 ILE-174   ALA-175  12.4 13.1 143.2 -116.5 26.2 27.2 231.4
 ALA-175   LYS-176  14.0 15.6 114.8 -89.6 93.6 104.0 -15.4
 LYS-176   ALA-177  17.6 17.3 -98.8 57.5 64.4 103.7 9.7
 ALA-177   HIS-178  17.2 17.4 -50.1 47.8 117.8 130.7 -27.8
 HIS-178   GLY-179  15.2 14.7 15.4 62.0 8.4 35.9 457.9
 GLY-179   GLY-180  14.9 14.2 -110.2 -134.6 103.6 80.8 -293.6
 GLY-180   PHE-181  11.0 12.5 -120.6 -0.6 95.3 123.2 -407.0
 PHE-181   SER-182  9.1 9.5 -29.3 -8.4 52.0 52.7 159.3
 SER-182   VAL-183  7.0 7.3 -6.3 5.9 122.0 126.6 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-331   THR-332  2.3 2.3 2.2 -6.4 91.4 91.4 19.0
 THR-332   THR-333  1.5 1.3 14.2 -13.6 81.1 76.5 23.7
 THR-333   VAL-334  5.1 4.9 -6.0 -4.2 109.5 109.7 13.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-352   SER-353  4.3 3.7 39.9 -24.9 35.7 23.9 70.1
 SER-353   LYS-354  3.9 3.0 20.6 -11.3 98.5 97.6 -7.5
 LYS-354   SER-355  2.3 2.7 32.8 -11.7 32.9 29.8 118.5
 SER-355   ARG-356  4.9 5.3 -2.8 4.4 105.3 97.1 21.3
 SER-355   ARG-356  4.9 5.3 -2.8 4.4 105.3 97.1 21.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-355   ARG-356  4.9 5.3 -2.8 4.4 105.3 97.1 21.3
 SER-355   ARG-356  4.9 5.3 -2.8 4.4 105.3 97.1 21.3
 ARG-356   LEU-357  7.7 7.8 20.3 -70.5 96.1 89.8 69.6
 LEU-357   LEU-358  9.9 10.0 64.1 -49.2 47.1 75.1 -20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees