Tarm

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-69   PHE-70  3.9 4.1 0.8 -2.6 167.2 168.4 36.8
 PHE-70   GLU-71  3.9 4.2 3.4 1.1 115.5 115.3 -22.8
 GLU-71   TYR-72  6.9 7.1 -4.9 0.5 100.6 98.3 10.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-207   VAL-208  1.6 1.9 -4.0 -5.1 35.1 36.6 75.3
 VAL-208   TYR-209  2.5 2.3 5.2 -3.5 70.3 71.6 1.3
 TYR-209   TYR-210  4.6 4.4 -3.4 4.9 104.4 102.7 -8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees