Maf-Like Protein Ycef

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-72   VAL-73  3.1 3.7 1.2 -4.0 149.2 142.9 3.1
 VAL-73   ILE-74  3.2 3.5 -2.5 11.0 111.1 112.9 30.3
 ILE-74   LEU-75  4.5 4.5 -3.0 -5.9 39.2 41.1 83.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-100   HIS-101  6.7 6.5 2.6 -1.3 167.0 168.6 -16.6
 HIS-101   GLN-102  5.0 4.9 2.4 -1.1 107.8 104.8 68.7
 GLN-102   VAL-103  3.0 2.8 1.2 3.8 109.2 111.5 -22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-121   THR-122  6.7 6.4 -1.4 -6.7 0.4 4.6 57.2
 THR-122   ASP-123  5.3 5.1 -7.7 14.7 75.7 77.5 1.6
 ASP-123   VAL-124  4.5 4.3 0.0 2.5 138.3 136.9 -2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-161   LYS-162  1.6 1.6 -11.8 13.3 80.3 79.2 294.6
 LYS-162   ILE-163  2.4 2.3 17.6 -1.3 170.0 171.5 -258.4
 ILE-163   ASN-164  3.8 3.8 1.1 1.6 91.0 92.6 54.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees