Glucosamine-6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-9   GLU-10  1.8 2.0 2.3 1.0 116.2 113.8 4.2
 GLU-10   GLN-11  4.4 4.5 -3.8 0.6 62.1 59.4 -4.7
 GLN-11   VAL-12  4.5 4.4 0.3 -0.8 148.2 147.9 6.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-134   MET-135  4.1 4.2 2.5 1.1 174.8 176.8 -48.1
 MET-135   GLY-136  3.9 3.9 1.8 2.0 106.9 106.7 19.5
 GLY-136   GLY-137  7.1 7.1 -7.4 4.3 13.0 8.4 78.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-154   SER-155  18.9 19.9 9.2 -12.5 93.2 104.9 94.4
 SER-155   ARG-156  19.4 19.6 -0.3 15.0 72.8 69.4 51.6
 ARG-156   THR-157  17.4 17.5 10.3 -13.6 66.2 63.8 4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-198   VAL-199  7.0 6.9 4.6 -4.3 123.2 122.1 6.3
 VAL-199   MET-200  7.0 6.7 6.4 -5.2 159.1 158.2 -46.6
 MET-200   ILE-201  5.3 5.1 -0.1 -1.6 55.0 55.9 42.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-234   ALA-235  11.6 11.6 -6.9 -2.5 129.8 126.3 -83.5
 ALA-235   ILE-236  10.7 10.5 2.7 1.0 32.0 32.5 34.1
 ILE-236   MET-237  9.0 8.8 0.9 -4.6 48.5 52.6 -97.5
 MET-237   VAL-238  8.5 8.2 0.7 1.8 51.9 45.9 46.5
 VAL-238   CYS-239  5.7 5.5 1.8 10.6 38.6 38.8 283.8
 CYS-239   ASP-240  6.0 6.1 -10.6 5.7 148.4 143.9 -171.3
 ASP-240   GLU-241  4.5 4.4 6.1 -7.9 48.2 50.6 -80.5
 GLU-241   PRO-242  6.4 6.4 -3.0 4.4 104.5 102.6 66.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  9.5 9.7 -2.7 -3.7 92.2 95.1 21.4
 THR-244   MET-245  11.5 11.5 -3.8 -7.8 46.9 44.0 114.3
 MET-245   GLU-246  13.5 13.3 11.0 -3.5 78.2 80.0 -10.2
 GLU-246   LEU-247  16.8 16.6 0.8 3.8 64.5 57.9 32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-260   GLU-261  15.8 15.8 -9.3 9.3 66.0 68.4 -3.5
 GLU-261   ASN-262  17.0 16.9 -22.7 19.3 55.9 61.7 12.5
 ASN-262   ILE-263  13.8 13.8 -12.4 8.6 119.2 123.1 -75.9
 ILE-263   LYS-264  11.5 11.4 -3.5 -28.0 123.0 129.2 -271.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees