Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-212   PRO-213  3.9 4.1 0.4 2.4 67.8 69.1 21.8
 PRO-213   VAL-214  4.1 4.2 -3.0 -20.3 64.4 59.3 62.1
 VAL-214   ARG-215  7.1 6.8 -28.5 47.8 134.2 141.8 64.5
 ARG-215   ASP-216  9.9 9.3 -11.6 8.0 85.7 91.5 15.8
 ASP-216   VAL-217  13.2 11.5 3.3 -9.8 81.4 67.0 -16.9
 VAL-217   ASP-218  15.9 14.8 -10.1 29.0 92.0 92.2 3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-323   LYS-324  12.3 11.7 1.3 -0.7 131.7 124.3 -15.3
 LYS-324   LYS-325  15.7 15.0 3.5 -6.3 107.6 97.7 5.4
 LYS-325   GLU-326  16.4 15.5 3.7 -9.5 44.1 33.4 -45.1
 GLU-326   GLU-327  18.4 17.2 13.4 -4.6 47.7 47.6 31.6
 GLU-327   GLY-328  15.3 13.8 -22.1 24.6 64.0 69.8 -9.5
 GLY-328   GLY-329  13.9 12.1 -3.0 -10.4 55.8 37.8 53.2
 GLY-329   ARG-330  12.0 11.2 20.9 -51.2 168.5 147.4 187.3
 ARG-330   HIS-331  12.0 12.8 5.6 18.0 103.3 94.2 -55.5
 HIS-331   THR-332  15.2 16.2 4.6 3.4 116.4 117.0 -33.4
 THR-332   GLY-333  14.4 14.9 -12.1 -4.1 110.7 108.4 -27.9
 GLY-333   PHE-334  13.4 13.1 33.4 -14.6 120.1 133.0 -57.8
 PHE-334   PHE-335  10.7 10.9 0.1 2.7 103.3 109.8 1.9
 PHE-335   SER-336  11.3 11.5 -1.3 0.7 104.6 94.9 32.0
 SER-336   GLY-337  11.6 11.4 19.3 -16.2 123.3 126.5 -30.7
 GLY-337   TYR-338  8.7 8.4 0.9 -5.9 71.0 67.2 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-341   PHE-342  2.0 1.9 -0.3 0.5 149.8 149.1 -2.2
 PHE-342   TYR-343  3.1 3.4 -10.1 12.9 134.9 133.8 41.5
 TYR-343   PHE-344  3.2 3.4 -7.1 2.8 143.2 138.8 -23.8
 PHE-344   ARG-345  5.4 6.1 -3.3 0.6 124.2 123.4 0.6
 ARG-345   THR-346  6.0 6.8 -5.6 8.0 60.7 61.2 -12.0
 THR-346   THR-347  8.6 9.0 -3.7 5.9 18.2 9.5 -29.0
 THR-347   ASP-348  8.6 8.8 2.4 -4.9 128.5 121.0 6.4
 ASP-348   VAL-349  6.9 6.7 -14.5 11.9 35.9 30.4 46.9
 VAL-349   THR-350  7.3 7.1 -2.7 3.4 52.6 54.6 -8.4
 THR-350   GLY-351  5.8 5.5 4.9 -10.3 88.5 91.5 -5.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-376   PRO-377  13.5 13.2 2.2 2.9 31.2 32.3 21.2
 PRO-377   VAL-378  15.2 14.8 5.9 4.9 39.3 38.5 69.3
 VAL-378   ALA-379  13.5 13.1 -9.3 3.6 143.0 140.3 -41.8
 ALA-379   LEU-380  14.1 14.3 -6.0 -1.5 98.6 102.6 -21.5
 LEU-380   GLU-381  12.8 13.3 -8.6 5.2 135.7 125.4 -21.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-392   ARG-393  9.1 9.0 2.8 8.3 46.9 51.6 58.4
 ARG-393   THR-394  8.7 8.5 -4.9 -6.9 116.5 115.8 -31.1
 THR-394   VAL-395  6.8 6.5 -19.6 18.7 68.0 70.0 12.2
 VAL-395   GLY-396  7.5 7.4 2.1 8.0 57.0 61.1 21.0
 GLY-396   ALA-397  7.5 7.2 -12.0 14.0 143.6 148.6 2.4
 ALA-397   GLY-398  6.8 6.8 -19.0 21.6 95.5 90.3 -19.7
 GLY-398   VAL-399  8.2 8.0 -6.5 -5.2 134.3 135.9 -54.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees