Glutaminyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   PRO-32  11.7 12.3 -2.7 -11.1 68.6 75.1 -40.5
 PRO-32   PRO-33  11.9 12.1 -27.1 -3.4 59.7 46.4 143.6
 PRO-33   GLU-34  15.7 15.4 -72.9 78.9 52.6 82.9 18.3
 GLU-34   PRO-35  17.6 16.9 21.9 -8.5 69.6 73.7 135.6
 PRO-35   ASN-36  20.5 20.3 43.8 -16.9 138.1 137.0 -206.6
 ASN-36   GLY-37  22.1 22.3 37.1 -34.4 94.9 100.3 -18.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-64   PHE-65  11.9 12.5 17.9 -8.1 136.5 138.3 -60.9
 PHE-65   ASP-66  15.1 15.3 -48.2 40.1 55.4 47.5 16.1
 ASP-66   ASP-67  15.2 13.8 -23.9 4.4 78.7 64.2 164.2
 ASP-67   THR-68  18.4 16.9 44.8 -45.0 121.5 120.6 39.7
 THR-68   ASN-69  17.5 16.4 24.3 -48.4 127.4 136.3 143.5
 ASN-69   PRO-70  20.2 19.1 -20.4 24.6 114.5 113.7 -17.9
 LYS-72   GLU-73  26.9 23.3 -45.8 -50.9 119.2 156.2 -763.3
 GLU-73   ASP-74  24.6 23.2 -174.6 169.5 101.8 122.8 128.6
 ASP-74   ILE-75  27.5 25.8 91.9 -23.0 37.1 20.5 603.3
 ILE-75   GLU-76  26.5 25.8 -125.0 118.1 100.8 103.9 -125.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-97   TYR-98  12.3 12.7 14.1 -9.5 145.9 147.1 -44.9
 TYR-98   SER-99  14.2 14.4 15.7 -7.5 124.1 123.1 0.5
 SER-99   SER-100  13.1 13.1 0.3 2.1 86.4 82.1 62.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-215   CYS-216  7.1 6.9 2.1 0.3 111.7 111.5 16.5
 CYS-216   ILE-217  4.0 3.8 -0.3 -2.8 41.9 40.2 18.6
 ILE-217   SER-218  6.7 6.6 5.0 -7.2 150.8 146.5 -26.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-235   ASN-236  3.9 4.6 4.6 -12.8 54.4 56.3 -60.6
 ASN-236   ARG-237  3.0 3.4 9.8 -3.7 50.8 46.4 83.0
 ARG-237   ARG-238  2.3 2.5 10.0 -5.7 110.4 105.9 -6.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-250   VAL-251  9.5 9.7 52.5 -28.0 69.8 81.0 32.7
 VAL-251   HIS-252  6.7 6.6 13.1 -21.6 21.1 20.8 -76.7
 HIS-252   PRO-253  5.7 5.1 -0.6 -2.2 93.2 86.7 0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-255   TYR-256  5.5 5.7 3.2 -3.8 109.6 111.8 -24.6
 TYR-256   GLU-257  9.2 9.4 -6.0 -5.1 74.3 74.2 31.5
 GLU-257   PHE-258  11.1 11.2 -9.5 -1.1 99.1 88.6 22.1
 PHE-258   SER-259  14.6 15.0 -7.1 15.3 42.8 54.3 -54.5
 SER-259   ARG-260  16.9 17.3 -1.1 -14.0 106.6 119.7 -70.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees