Probable Atp-Dependent RNA Helicase Ddx48
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-237
ARG-238
5.0
4.8
21.3
-28.9
131.5
123.6
-53.4
ARG-238
ILE-239
3.7
3.9
-16.6
9.6
31.8
28.3
128.0
ILE-239
LEU-240
5.9
5.9
6.0
-3.7
129.6
127.6
-36.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-364
ILE-365
14.5
14.7
26.6
-55.2
113.6
106.6
132.7
ILE-365
GLY-366
13.8
13.4
154.6
-155.5
58.7
40.7
-75.1
GLY-366
ARG-367
12.0
11.2
-56.5
64.5
72.9
80.3
185.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-373
LYS-374
8.2
8.3
1.3
-4.0
95.5
91.9
53.4
LYS-374
GLY-375
11.8
11.9
-21.2
6.0
133.5
150.8
-21.1
GLY-375
VAL-376
12.8
12.9
-13.2
20.0
97.3
84.6
90.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees