Glycine Betaine/carnitine/choline-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-112   PHE-113  10.8 10.7 5.2 -4.1 55.9 56.1 34.8
 PHE-113   ASP-114  7.9 7.8 -1.5 6.0 80.1 83.0 -60.5
 ASP-114   ASN-115  4.1 4.1 8.1 -1.8 23.5 20.5 135.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-199   ASP-200  4.8 4.8 1.1 -13.3 169.9 169.0 144.0
 ASP-200   GLY-201  4.3 4.4 -8.0 5.1 74.4 73.1 16.9
 GLY-201   ARG-202  7.5 7.8 -1.1 3.3 45.8 42.5 -36.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-206   GLY-207  9.8 9.7 15.8 0.6 114.3 105.2 -92.1
 GLY-207   LEU-208  12.4 12.6 3.0 -21.2 109.1 115.7 137.5
 LEU-208   LYS-209  10.5 10.7 11.9 -32.5 156.9 161.4 322.7
 LYS-209   MET-210  12.1 11.8 10.5 -2.7 122.0 123.9 -146.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-219   PRO-220  5.8 5.6 0.1 -0.8 110.9 107.1 78.3
 PRO-220   TYR-221  1.9 1.8 6.5 -8.0 123.0 121.8 -3.8
 TYR-221   ASP-222  2.8 2.7 1.1 -6.3 89.1 90.5 37.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees