Core Protein P3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-109   HIS-110  11.6 15.7 28.8 -31.5 88.4 50.8 -21.1
 HIS-110   ASP-111  13.7 16.0 -136.3 -25.0 128.4 142.2 -646.7
 ASP-111   SER-112  15.9 18.5 72.5 -44.6 81.1 31.6 188.8
 SER-112   ALA-113  16.5 16.9 45.5 30.8 43.3 55.7 422.0
 ALA-113   TYR-114  19.2 20.2 -34.4 -23.3 150.4 73.6 -128.7
 TYR-114   GLU-115  18.6 20.4 -109.0 -91.3 133.3 86.4 -339.7
 GLU-115   PRO-116  17.5 16.8 139.9 -12.6 70.1 34.6 595.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-127   SER-128  3.2 5.0 -4.7 -2.0 143.5 140.2 -42.8
 SER-128   MET-129  3.2 5.7 26.9 21.0 73.0 77.9 78.1
 MET-129   LEU-130  6.5 8.8 -58.8 -20.1 34.2 53.2 339.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-229   ALA-230  23.4 22.8 -46.6 47.0 160.3 139.9 -30.1
 ALA-230   LEU-231  21.9 20.8 -12.8 -13.1 92.6 96.3 -16.0
 LEU-231   HIS-232  18.3 17.4 -13.2 19.6 98.4 96.6 -4.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-234   ALA-235  17.0 17.5 8.5 15.4 83.4 89.0 41.9
 ALA-235   ASN-236  17.0 18.4 10.5 -18.0 131.7 146.5 61.9
 ASN-236   ASP-237  20.2 20.7 2.3 -9.7 152.9 139.5 21.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-283   VAL-284  19.1 19.2 -5.3 40.8 123.3 108.0 83.9
 VAL-284   VAL-285  15.9 15.5 -35.8 -29.3 97.7 142.5 -165.6
 VAL-285   GLN-286  15.5 14.8 9.9 -76.7 111.1 63.0 35.4
 GLN-286   LEU-287  13.9 11.7 28.0 58.2 62.3 69.2 202.9
 LEU-287   LEU-288  12.7 11.1 -12.6 7.8 64.1 53.0 16.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-756   GLN-757  6.9 9.0 1.1 1.6 45.6 38.1 -1.4
 GLN-757   ALA-758  9.3 11.1 21.5 -14.6 46.2 42.4 21.4
 ALA-758   ASP-759  7.2 8.4 -4.8 2.7 70.0 83.6 15.8
 ASP-759   HIS-760  8.0 9.5 -9.7 12.6 89.8 106.3 1.0
 HIS-760   VAL-761  11.6 13.0 0.7 0.5 20.7 8.0 11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-1002   ILE-1003  36.3 37.1 -7.8 62.8 113.2 103.1 130.8
 ILE-1003   GLY-1004  37.3 39.9 3.6 -125.0 22.0 78.4 -445.0
 GLY-1004   VAL-1005  38.6 43.0 42.4 36.1 81.8 42.8 86.5
 VAL-1005   HIS-1006  41.0 43.7 13.2 -56.6 52.2 40.9 -241.5
 HIS-1006   GLY-1007  40.2 42.3 25.4 32.1 50.7 36.6 248.1
 GLY-1007   VAL-1008  41.9 41.4 -65.2 -11.9 98.9 87.4 9.5
 VAL-1008   ARG-1009  42.5 38.2 6.6 2.0 46.5 24.3 47.0
 ARG-1009   LEU-1010  39.7 36.0 6.4 -0.4 75.3 100.3 -29.0
 LEU-1010   ASP-1011  40.9 33.8 -34.7 -1.1 98.1 134.2 -76.3
 ASP-1011   PRO-1012  39.4 30.5 0.8 -8.3 24.1 54.2 -30.0
 PRO-1012   ASN-1013  36.7 30.1 -173.7 11.9 132.0 89.7 492.6
 ASN-1013   GLY-1014  37.9 27.4 171.1 -137.5 69.1 37.5 218.4
 GLY-1014   ASP-1015  41.5 24.3 -78.2 -51.8 73.7 143.8 -290.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees