Glutamate Receptor 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-108   LEU-109  4.5 4.7 -11.8 -2.5 50.0 48.8 65.1
 LEU-109   GLY-110  1.4 1.6 11.5 -3.1 55.9 60.3 22.6
 GLY-110   ILE-111  2.9 2.9 -11.1 2.8 51.8 46.5 37.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-192   GLU-193  8.7 8.8 -2.2 -17.4 72.3 69.5 27.8
 GLU-193   SER-194  5.6 5.6 8.1 13.2 52.3 48.7 85.7
 SER-194   THR-195  2.5 2.4 -6.0 9.3 129.9 126.9 30.1
 THR-195   MET-196  2.6 3.1 -11.1 -0.3 147.8 146.7 -89.8
 MET-196   ASN-197  4.8 5.3 6.0 -7.3 55.2 53.1 -2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-215   ASP-216  8.2 8.3 9.9 -13.7 147.6 149.3 28.5
 ASP-216   SER-217  5.3 5.4 -4.5 3.5 103.3 103.1 8.4
 SER-217   LYS-218  1.6 1.6 1.8 -18.6 108.5 114.5 43.5
 LYS-218   GLY-219  3.0 2.7 11.9 -6.1 62.4 55.7 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees