1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-184   GLY-185  2.4 2.5 -2.9 50.0 58.1 66.2 -576.2
 GLY-185   SER-186  0.7 1.4 175.1 -6.8 81.4 51.4 695.1
 SER-186   GLY-187  4.3 4.6 13.0 3.4 103.4 99.2 -31.7
 GLY-187   GLY-188  6.6 6.5 6.6 -7.5 109.5 110.8 -3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-227   LYS-228  3.8 3.8 0.1 -5.5 111.8 108.8 50.2
 LYS-228   GLY-229  0.6 0.4 4.3 -4.6 45.1 42.9 5.5
 GLY-229   LEU-230  1.4 1.6 2.6 -0.5 62.5 58.7 0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-323   ALA-324  9.0 9.3 3.5 5.7 144.6 140.3 -70.3
 ALA-324   PHE-325  6.4 6.5 -1.6 7.4 90.6 89.5 10.2
 PHE-325   GLU-326  7.4 7.8 -3.5 2.6 74.2 61.2 7.7
 GLU-326   GLN-327  10.9 11.1 16.7 -23.2 171.9 174.8 48.9
 GLN-327   GLY-328  10.1 9.5 18.9 -26.0 120.2 114.3 31.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-373   CYS-374  12.9 12.5 0.3 4.4 100.9 103.9 -7.9
 CYS-374   VAL-375  13.6 13.3 -4.1 2.3 68.6 66.8 -34.5
 VAL-375   ASP-376  13.0 12.5 4.8 -3.8 49.9 46.2 33.8
 ASP-376   ASP-377  11.9 11.8 5.4 -2.2 88.8 81.0 0.6
 ASP-377   VAL-378  8.8 8.7 -4.5 -10.2 35.9 43.8 71.3
 VAL-378   LEU-379  8.1 7.4 10.8 4.5 80.0 84.4 -9.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-380   VAL-381  6.4 6.5 0.0 1.2 115.5 113.2 3.5
 VAL-381   ASP-382  3.4 3.3 2.2 3.6 53.7 55.4 26.1
 ASP-382   ALA-383  5.3 5.4 -6.6 5.3 60.3 59.4 -10.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees