Anti-Idiotypic Monoclonal Antibody (Light Chain)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-103   LEU-104  5.1 4.8 3.2 -13.3 153.3 160.5 22.1
 LEU-104   GLU-105  3.3 3.4 -0.3 6.4 103.1 88.8 7.6
 GLU-105   ILE-106  0.8 0.3 -19.0 -17.8 30.0 23.9 73.2
 ILE-106   LYS-107  3.2 2.9 6.6 -23.9 117.6 112.8 17.9
 LYS-107   ARG-108  4.2 4.1 -14.6 15.2 81.4 62.1 -4.5
 ARG-108   ALA-109  7.9 7.5 20.5 -0.5 115.0 108.7 -11.0

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees