Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-110
SER-111
4.8
4.9
-1.2
5.5
110.6
112.0
-45.3
SER-111
ILE-112
7.3
7.2
1.4
-1.7
39.2
40.3
39.6
ILE-112
LEU-113
9.1
9.2
-0.4
-7.3
152.9
152.2
-86.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-190
SER-191
1.9
1.9
-5.3
-0.2
59.2
60.7
13.7
SER-191
THR-192
3.4
3.4
2.6
3.0
125.8
120.6
-73.0
THR-192
SER-193
3.7
3.8
-1.8
-1.1
24.9
23.5
66.8
SER-193
ILE-194
1.3
1.5
0.7
2.5
58.7
55.8
5.9
SER-193
ILE-194
1.3
1.5
0.7
2.5
58.7
55.8
5.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-193
ILE-194
1.3
1.5
0.7
2.5
58.7
55.8
5.9
SER-193
ILE-194
1.3
1.5
0.7
2.5
58.7
55.8
5.9
ILE-194
GLU-195
3.2
3.2
0.7
-9.5
67.1
67.7
-95.3
GLU-195
TYR-196
5.7
5.8
11.9
-7.8
32.2
37.4
35.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-210
ILE-211
8.2
8.1
0.0
-5.3
42.4
50.2
-142.8
ILE-211
ASP-212
8.5
8.7
4.8
3.5
33.7
31.9
165.0
ASP-212
SER-213
5.5
5.8
9.5
3.9
100.1
94.7
-65.7
SER-213
LYS-214
3.3
3.1
12.8
-2.6
71.8
80.4
143.5
LYS-214
GLY-215
1.5
1.2
-23.8
28.6
55.5
62.9
-86.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-249
TRP-250
15.3
15.6
-9.6
3.6
114.4
111.1
-108.2
TRP-250
TRP-251
11.8
12.0
3.6
-6.9
81.7
80.5
-53.3
TRP-251
ARG-252
10.0
10.1
-0.9
16.1
129.6
131.1
118.6
ARG-252
GLY-253
12.9
12.7
-53.9
115.6
150.3
138.8
680.8
GLY-253
ASN-254
12.1
10.1
-29.8
16.0
105.7
153.0
-24.1
ASN-254
GLY-255
13.4
10.6
62.3
-8.7
113.9
68.9
-195.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees