Bse634i Restriction Endonuclease

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-89   TYR-90  1.6 1.7 -5.6 0.0 99.6 99.6 -2.2
 TYR-90   ARG-91  2.4 2.1 3.2 10.8 21.5 17.7 120.5
 ARG-91   VAL-92  2.4 1.8 -18.1 9.2 100.3 99.6 -65.9
 VAL-92   LYS-93  3.5 3.3 -0.6 4.0 112.6 110.4 30.8
 VAL-92   LYS-93  3.5 3.3 -0.6 4.0 112.6 110.4 30.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-92   LYS-93  3.5 3.3 -0.6 4.0 112.6 110.4 30.8
 VAL-92   LYS-93  3.5 3.3 -0.6 4.0 112.6 110.4 30.8
 LYS-93   ARG-94  5.9 5.7 -4.3 4.4 68.2 64.8 -4.8
 ARG-94   GLU-95  7.0 6.7 -4.1 3.6 16.3 17.2 2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-96   ASN-97  5.3 5.0 5.5 4.7 47.0 50.0 91.1
 ASN-97   ASP-98  3.6 3.2 -34.6 29.1 127.8 120.0 -83.5
 ASP-98   TYR-99  4.0 3.8 -7.5 6.8 60.6 59.2 17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-160   ASN-161  5.8 6.0 0.7 4.7 62.4 58.7 70.8
 ASN-161   LEU-162  5.8 5.9 -7.2 7.7 135.3 138.4 3.5
 LEU-162   PRO-163  8.4 8.5 -5.5 4.1 146.2 144.1 25.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-169   GLU-170  17.6 17.8 18.1 -24.1 20.1 15.7 -50.6
 GLU-170   ASN-171  16.4 16.5 9.9 3.4 80.7 76.7 53.7
 ASN-171   ILE-172  12.6 12.8 -14.1 7.9 72.5 88.4 23.4
 ILE-172   ASP-173  13.0 13.4 8.8 -12.1 43.5 33.5 -50.9
 ASP-173   VAL-174  15.5 15.4 -0.1 6.8 142.1 141.5 107.3
 VAL-174   ALA-175  12.8 12.8 -4.2 3.0 81.9 84.9 1.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-278   SER-279  10.2 10.5 0.9 -4.0 92.4 90.9 24.8
 SER-279   PHE-280  6.7 7.0 6.7 -5.1 163.7 160.3 -18.6
 PHE-280   GLU-281  4.6 4.8 1.6 -1.8 121.3 122.7 -3.2
 GLU-281   ASP-282  6.3 6.5 -1.2 0.0 69.0 67.5 -3.4
 ASP-282   ILE-283  9.3 9.5 -8.6 10.6 27.7 29.4 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees