Ras-Related C3 Botulinum Toxin Substrate 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-6   VAL-7  6.4 6.4 4.7 4.5 67.1 65.5 10.1
 VAL-7   VAL-8  4.5 4.6 16.1 -7.6 44.7 41.4 56.9
 VAL-8   VAL-9  5.7 5.8 3.2 -8.8 79.9 80.1 -33.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-33   PRO-34  7.0 6.9 9.9 -2.5 23.6 14.4 38.1
 PRO-34   THR-35  7.8 7.8 -3.5 -21.7 139.2 124.1 -279.5
 THR-35   VAL-36  6.8 6.6 24.5 -41.1 47.3 29.2 2.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-55   TRP-56  4.7 4.9 1.9 -1.0 88.7 88.2 -14.3
 TRP-56   ASP-57  0.9 1.2 3.5 19.0 46.7 47.8 76.3
 ASP-57   THR-58  1.0 1.2 44.5 -43.3 96.8 111.5 19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees