Periplasmic Binding Protein/laci Transcriptional Regulator
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-115
GLY-116
10.6
10.8
3.3
-6.3
56.4
57.7
40.6
GLY-116
THR-117
8.2
8.3
-9.0
13.8
139.0
140.1
112.8
THR-117
ASP-118
7.0
6.8
-6.9
-1.0
74.6
74.5
10.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-248
ILE-249
5.0
5.1
-3.5
5.8
111.1
110.7
-45.4
ILE-249
VAL-250
3.7
3.6
4.5
-7.1
46.1
46.0
-23.2
VAL-250
GLN-251
7.1
7.0
10.6
-9.5
42.3
44.0
186.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-271
SER-272
26.0
26.2
11.9
-111.0
55.9
72.3
-1195.6
LEU-279
ILE-280
12.7
12.2
-44.2
-17.0
142.7
140.8
-1032.2
ILE-280
ASP-281
11.7
11.8
11.0
-3.7
35.4
36.2
280.8
ASP-281
VAL-282
10.9
10.8
7.4
-6.5
74.2
75.5
3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees