Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
8.6
8.4
6.8
-13.0
154.7
161.2
40.7
THR-107
LEU-108
6.4
6.5
-9.7
1.6
99.0
100.7
-14.1
LEU-108
GLY-109
2.9
2.8
19.5
-18.4
155.9
147.0
-8.6
GLY-109
ILE-110
1.5
1.2
33.3
-29.1
76.5
70.8
23.2
ILE-110
SER-111
4.7
4.4
8.9
-2.3
83.8
84.1
19.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
10.6
10.7
-9.2
7.6
76.2
83.7
23.0
GLY-209
LEU-210
7.4
7.6
3.7
-9.8
77.2
84.3
8.1
LEU-210
ILE-211
3.8
4.0
7.4
-21.5
9.7
19.8
-53.6
ILE-211
ASP-212
3.8
3.2
160.4
-154.7
66.9
94.6
-88.5
ASP-212
SER-213
0.9
2.4
-132.6
92.0
49.4
51.1
158.8
SER-213
LYS-214
3.3
2.5
24.7
-12.2
94.1
93.4
7.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees