Adenosine Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-21   ILE-22  2.9 2.1 13.7 -18.5 100.8 110.6 23.0
 ILE-22   LEU-23  1.5 2.0 11.3 7.1 43.9 48.5 42.6
 LEU-23   ASP-24  5.0 5.5 -17.3 17.5 105.1 101.7 10.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-67   GLY-68  4.9 4.9 -13.0 66.4 72.1 78.6 -59.2
 GLY-68   GLY-69  1.1 2.6 14.2 -63.9 43.1 65.5 -136.7
 GLY-69   SER-70  2.5 2.3 -148.8 87.8 61.9 43.4 196.2
 SER-70   ALA-71  5.5 5.5 1.9 8.4 112.2 112.8 3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-103   LYS-104  8.9 7.8 -26.4 37.5 110.2 101.4 -18.7
 LYS-104   GLU-105  11.3 10.5 -10.1 14.5 141.8 141.6 10.9
 GLU-105   LEU-106  13.8 12.9 -6.1 8.2 143.0 151.8 -24.3
 LEU-106   CYS-107  11.2 10.2 4.8 -2.0 68.7 74.5 -12.3
 CYS-107   ASP-108  9.2 9.8 -14.7 -2.0 118.8 110.1 -31.7
 ASP-108   LYS-109  12.8 13.6 17.4 -17.3 12.1 21.2 24.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-123   THR-124  6.9 5.8 -23.3 36.3 150.5 141.6 115.6
 THR-124   GLY-125  6.0 4.6 -54.9 101.7 100.0 101.6 -65.0
 GLY-125   THR-126  4.6 3.1 30.9 -14.9 12.7 46.0 53.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-140   HIS-141  9.1 8.8 -11.4 16.1 165.8 165.7 -20.8
 HIS-141   LEU-142  7.0 7.0 23.2 29.7 90.2 96.8 8.0
 LEU-142   GLY-143  4.7 3.9 -126.1 -140.8 155.5 116.0 325.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees