Galactose/glucose-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-14   ASN-15  9.9 9.9 0.9 -9.7 79.8 78.8 -354.8
 ASN-15   PHE-16  6.7 6.7 5.6 -3.2 38.1 32.0 160.8
 PHE-16   MET-17  5.9 6.0 4.7 0.4 92.0 93.4 86.3
 MET-17   SER-18  7.6 7.8 -1.7 -3.2 47.3 49.5 127.2
 SER-18   VAL-19  5.6 5.6 -2.8 -2.6 116.7 116.1 -559.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-110   ASP-111  8.7 8.5 -3.4 6.2 124.3 127.5 279.4
 ASP-111   SER-112  10.3 10.2 -1.3 3.2 58.5 58.7 -251.4
 SER-112   LYS-113  12.5 12.4 -1.8 7.7 113.4 113.8 8.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-210   ASN-211  15.7 15.8 3.2 -3.0 69.4 65.3 236.7
 ASN-211   ASP-212  12.7 12.7 5.8 -8.4 51.2 49.0 -154.8
 ASP-212   ALA-213  11.5 11.5 -2.4 1.7 163.6 162.5 19.0
 ALA-213   MET-214  11.7 11.7 0.2 2.3 79.7 82.8 53.6
 MET-214   ALA-215  15.5 15.5 -3.8 1.7 82.6 83.3 -84.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-258   ASN-259  3.0 2.9 0.1 -0.4 94.9 98.6 158.6
 ASN-259   ASN-260  4.7 4.6 -3.9 -2.2 33.2 36.8 2.8
 ASN-260   GLN-261  5.6 5.7 4.1 -4.0 91.3 91.0 54.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-292   VAL-293  8.0 8.3 -9.4 8.5 87.1 84.6 -126.3
 VAL-293   PRO-294  4.6 4.8 12.2 -2.6 87.0 84.1 -124.0
 PRO-294   TYR-295  3.0 3.1 -2.9 -0.6 36.2 35.5 139.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees