Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-97   LEU-98  9.2 9.3 11.6 -11.9 117.3 117.5 -13.8
 LEU-98   ARG-99  5.7 5.7 -6.8 12.3 1.2 5.7 -26.0
 ARG-99   LYS-100  6.8 7.0 -1.2 1.4 64.2 70.4 24.5
 LYS-100   LEU-101  8.9 9.3 -5.8 -4.1 90.6 84.6 13.0
 LEU-101   VAL-102  6.9 7.6 4.7 15.5 135.4 135.7 -138.9
 VAL-102   GLY-103  3.8 4.5 -16.3 -3.0 160.5 154.0 -154.9
 VAL-102   GLY-103  3.8 4.5 -16.3 -3.0 160.5 154.0 -154.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-102   GLY-103  3.8 4.5 -16.3 -3.0 160.5 154.0 -154.9
 VAL-102   GLY-103  3.8 4.5 -16.3 -3.0 160.5 154.0 -154.9
 GLY-103   ARG-104  5.8 6.7 1.1 -2.5 64.4 74.4 1.2
 ARG-104   SER-105  7.9 9.2 -15.8 -10.5 120.6 118.9 -97.3
 SER-105   PHE-106  5.8 7.7 -34.2 39.4 144.0 130.5 2.6
 PHE-106   THR-107  3.7 4.2 39.3 -26.9 53.9 48.1 142.0
 THR-107   VAL-108  7.0 6.0 7.7 -13.7 20.0 34.3 -108.2
 VAL-108   ARG-109  6.7 5.1 27.5 -9.7 63.4 52.8 70.2
 ARG-109   ARG-110  8.2 6.9 -4.7 0.4 70.0 84.5 65.0
 ARG-110   MET-111  6.9 6.0 6.0 14.9 68.1 66.0 104.5
 MET-111   ASN-112  3.4 2.4 -4.4 -14.8 165.5 169.7 -145.5
 ASN-112   GLU-113  4.2 3.5 6.9 -6.2 77.3 75.3 -29.2
 GLU-113   LEU-114  7.5 6.9 -2.4 -7.1 76.6 86.5 -12.9
 LEU-114   GLU-115  6.8 6.7 4.2 8.0 32.9 29.8 85.8
 GLU-115   PRO-116  5.9 5.6 -2.2 -8.2 115.1 119.2 -46.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-145   PRO-146  13.5 13.7 9.5 0.3 38.5 40.4 37.0
 PRO-146   VAL-147  11.4 11.7 2.8 -11.6 35.6 38.6 -26.0
 VAL-147   GLN-148  13.6 13.5 9.9 -7.6 95.1 100.6 -4.1
 GLN-148   VAL-149  14.0 13.7 1.9 -1.6 84.5 93.0 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-223   GLU-224  4.8 6.5 -8.2 6.4 105.0 99.6 -33.4
 GLU-224   GLU-225  4.0 4.4 1.2 -9.7 34.3 36.8 -40.2
 GLU-225   LEU-226  1.5 1.6 -1.7 7.6 143.8 151.8 45.9
 LEU-226   VAL-227  3.5 4.2 -5.2 -8.7 106.1 109.8 -87.0
 VAL-227   ALA-228  6.5 6.5 10.4 1.2 64.1 79.4 50.8
 ALA-228   MET-229  5.9 5.3 -6.2 2.4 161.6 159.5 -24.9
 MET-229   ALA-230  3.7 3.1 -0.9 0.8 129.5 134.4 -2.0
 ALA-230   MET-231  6.5 6.1 -3.5 -2.1 100.7 97.8 9.6
 MET-231   LEU-232  9.0 8.4 9.9 -5.9 45.8 59.8 -4.2
 LEU-232   LEU-233  7.8 7.1 -3.8 13.7 159.6 173.4 76.3
 LEU-233   LEU-234  6.3 5.8 4.1 -9.4 66.9 64.1 -26.8
 LEU-234   ILE-235  9.9 9.4 3.4 -7.1 72.1 85.6 -30.6
 ILE-235   ALA-236  11.8 11.5 -3.2 -11.9 146.7 132.4 -71.7
 ALA-236   GLY-237  9.9 10.1 9.3 -25.8 38.4 18.6 -102.4
 GLY-237   HIS-238  9.9 9.0 0.3 16.4 75.6 62.4 25.7
 HIS-238   GLU-239  13.8 12.3 -54.8 78.9 108.8 111.8 64.0
 GLU-239   THR-240  15.0 15.3 -54.0 58.3 123.9 131.4 15.1
 THR-240   THR-241  13.3 13.9 24.7 -14.3 10.7 20.3 71.2
 THR-241   VAL-242  11.8 12.0 -4.1 -1.6 116.5 118.9 29.8
 VAL-242   ASN-243  15.0 15.3 -19.4 25.7 118.7 119.7 17.2
 ASN-243   LEU-244  16.9 17.1 -9.9 3.5 133.5 136.4 -44.5
 LEU-244   ILE-245  14.5 14.6 -2.4 4.8 141.8 144.4 25.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees