Ns5 Rdrp

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PRO-365   ASP-366  11.0 10.4 6.4 -10.5 74.1 64.2 -56.5  ASP-366   PRO-367  9.6 9.2 5.3 1.7 85.1 85.1 6.9  PRO-367   GLN-368  6.2 6.0 -8.3 -8.2 30.1 35.1 119.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLU-509   GLY-510  12.3 12.0 6.4 -7.9 149.7 158.3 34.8  GLY-510   LEU-511  13.5 13.3 1.1 -1.3 133.8 134.0 18.4  LEU-511   GLY-512  10.1 9.9 -1.1 -0.7 73.4 79.9 28.4  GLY-512   LEU-513  9.2 9.1 4.8 -0.4 84.8 88.4 -15.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLU-522   MET-523  9.0 9.0 4.5 0.5 158.6 156.7 -43.3  MET-523   SER-524  8.3 8.5 3.0 1.6 91.8 89.3 -3.0  SER-524   ARG-525  9.6 10.0 0.5 3.0 83.1 84.0 16.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLU-707   VAL-708  9.6 9.9 -1.6 4.6 140.5 141.1 34.2  VAL-708   PRO-709  6.9 7.3 3.7 -3.3 99.3 98.8 -0.3  PRO-709   PHE-710  6.8 7.1 -2.3 6.5 108.1 108.4 15.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees