Udp-Sugar Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-74   GLU-75  23.4 23.5 -8.8 13.3 156.6 157.0 144.7
 GLU-75   GLU-76  21.4 21.7 11.7 -11.4 93.0 90.4 -85.2
 GLU-76   VAL-77  20.1 20.4 2.3 -2.1 92.6 93.3 -45.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-193   LEU-194  0.4 0.4 2.0 -3.8 112.2 112.9 12.1
 LEU-194   LYS-195  2.4 2.4 -1.9 2.4 83.3 82.3 -4.0
 LYS-195   GLN-196  5.7 5.7 -2.5 -7.2 38.8 38.9 304.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-229   LEU-230  5.8 5.8 -13.6 2.9 15.6 21.5 366.7
 LEU-230   ILE-231  4.9 4.9 1.1 -0.9 92.9 92.8 -45.6
 ILE-231   TYR-232  4.4 4.5 3.1 -1.5 70.0 69.5 71.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-321   LEU-322  3.7 4.0 -1.8 5.0 166.8 162.5 136.0
 LEU-322   VAL-323  4.0 4.0 -3.9 7.6 109.8 113.8 70.4
 VAL-323   ALA-324  7.0 6.9 2.7 -12.7 27.1 28.3 -296.2
 ALA-324   ASN-325  7.7 7.5 -6.4 4.6 103.1 101.4 135.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-378   ILE-379  5.9 5.7 -4.5 8.5 75.2 76.1 56.8
 ILE-379   VAL-380  7.3 7.2 8.5 -13.2 138.5 139.5 58.8
 VAL-380   PRO-381  5.8 5.8 -0.5 2.9 66.4 68.6 84.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-411   LEU-412  2.2 1.9 -2.3 -2.6 96.0 97.1 -27.9
 LEU-412   PHE-413  1.9 2.2 2.1 3.3 66.3 69.6 175.3
 PHE-413   SER-414  3.4 3.7 -4.7 7.7 168.3 168.9 111.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees