Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
9.2
9.8
-19.8
-29.2
74.4
60.7
87.8
GLN-144
GLY-145
5.7
6.1
67.1
-11.0
70.5
47.2
121.6
GLY-145
LEU-146
2.4
2.7
30.2
-11.0
119.9
112.3
-19.2
LEU-146
THR-147
1.5
1.0
-11.4
0.3
60.5
65.1
0.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-240
THR-241
6.8
6.5
7.9
-5.3
111.8
112.8
15.7
THR-241
GLY-242
9.6
9.3
-10.9
12.2
18.4
16.7
-16.6
GLY-242
GLU-243
10.7
9.7
180.0
133.3
110.4
105.3
82.5
GLU-243
LEU-244
9.6
7.5
52.5
-8.1
104.7
133.8
-82.4
LEU-244
PHE-245
6.0
5.1
-16.3
29.8
12.2
33.2
-44.1
PHE-245
PHE-246
4.8
5.3
-164.8
145.0
69.8
44.6
30.9
PHE-246
ARG-247
2.0
2.4
83.9
-29.2
66.4
60.7
110.0
ARG-247
SER-248
4.0
4.1
-7.8
-2.5
57.5
73.4
50.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees