Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-74   LEU-75  4.2 4.7 8.3 -23.1 20.4 22.6 -66.3
 LEU-75   GLY-76  5.2 5.1 15.5 -8.1 54.7 54.2 21.5
 GLY-76   ARG-77  6.6 6.9 -5.0 -1.3 95.2 94.4 56.4
 ARG-77   PHE-78  9.7 10.0 -6.6 3.3 121.3 125.2 -28.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-157   SER-158  2.7 3.0 11.8 -8.3 50.2 57.5 36.8
 SER-158   LEU-159  1.8 1.5 -11.3 14.4 76.3 75.0 -17.9
 LEU-159   PRO-160  4.7 4.3 13.6 -0.1 41.0 33.4 64.4
 PRO-160   GLY-161  6.6 5.9 -10.6 9.1 74.1 83.4 -6.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees