Carboxyspermidine Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-172   GLY-173  3.3 3.5 2.5 -5.8 152.3 155.0 46.7
 GLY-173   ASP-174  1.3 1.6 14.3 -6.6 89.3 87.6 31.8
 ASP-174   HIS-175  2.6 2.5 -4.2 9.6 38.9 41.8 -42.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-179   ALA-180  10.8 10.4 -11.1 6.6 121.6 120.7 -37.8
 ALA-180   THR-181  10.0 9.5 11.6 2.7 119.7 119.1 -28.8
 THR-181   ASN-182  9.9 9.3 4.4 38.3 42.4 60.1 248.5
 ASN-182   PHE-183  9.6 8.5 -60.3 2.0 81.1 127.3 -148.0
 PHE-183   ASN-184  13.1 12.2 29.0 5.8 96.6 100.2 -30.2
 ASN-184   PRO-185  16.3 15.4 -8.2 -7.4 30.8 31.5 111.7
 PRO-185   GLU-186  15.4 14.9 -15.1 0.9 31.0 43.1 125.1
 GLU-186   ILE-187  17.4 18.2 -11.7 -15.2 71.2 52.7 158.1
 ILE-187   ASN-188  14.9 17.5 1.0 7.4 118.3 115.4 -29.3
 ASN-188   LEU-189  12.0 13.7 -13.0 -17.3 25.5 36.0 247.8
 LEU-189   ARG-190  14.3 14.0 23.1 -0.3 131.0 139.5 -222.1
 ARG-190   GLU-191  14.8 16.7 -5.2 0.6 69.7 58.0 40.4
 GLU-191   VAL-192  11.2 14.8 -13.6 17.8 44.3 55.1 24.4
 VAL-192   SER-193  10.1 11.3 -15.4 30.1 35.4 38.3 -125.8
 SER-193   SER-194  13.1 12.8 18.2 -6.6 121.0 139.7 -92.2
 SER-194   LYS-195  14.1 14.6 1.2 12.0 136.0 136.0 -60.7
 LYS-195   GLY-196  13.1 13.5 -28.7 5.1 111.0 103.4 -103.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-252   PHE-253  3.2 3.2 -7.9 8.7 74.6 70.5 11.2
 PHE-253   SER-254  1.6 2.0 13.1 -2.9 87.4 88.0 12.3
 SER-254   GLN-255  3.5 3.5 1.6 6.3 53.0 54.0 46.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-298   ALA-299  7.0 6.9 11.1 -0.3 72.4 75.7 -1.8
 ALA-299   LYS-300  5.7 5.2 7.1 18.3 46.5 42.7 156.2
 LYS-300   ASP-301  3.9 3.8 -21.8 -14.8 72.6 73.8 81.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees