Elongation Factor 1-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-32   GLY-33  8.4 8.2 -168.8 -72.4 121.6 174.0 141.2
 GLY-33   ILE-34  8.8 8.0 82.7 49.4 46.1 66.9 93.8
 ILE-34   ASP-35  5.5 4.5 -3.7 28.7 108.5 165.2 29.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-56   ALA-57  3.9 5.5 -28.1 13.0 96.4 98.6 -6.0
 ALA-57   TRP-58  6.8 7.6 3.4 -17.1 133.0 139.6 22.4
 TRP-58   VAL-59  8.0 7.2 -25.1 2.0 85.9 91.6 6.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees