Uncharacterized RNA Methyltransferase Pyrab10780

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-109   ARG-110  3.8 3.9 3.2 -5.8 101.5 99.9 152.5
 ARG-110   ILE-111  5.4 5.5 -3.9 0.5 150.4 147.3 -78.3
 ILE-111   ASP-112  7.2 7.3 -1.5 12.2 80.2 84.3 -48.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-133   ILE-134  11.9 11.7 -0.1 -0.2 85.1 84.2 -92.9
 ILE-134   ASP-135  8.2 8.0 0.4 -0.1 74.7 73.1 10.5
 ASP-135   GLU-136  6.5 6.4 1.1 -0.5 46.2 44.8 67.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-143   SER-144  4.5 4.3 1.3 2.0 69.8 69.0 24.9
 SER-144   ARG-145  3.9 3.9 5.6 -3.9 40.9 39.5 124.2
 ARG-145   GLU-146  5.4 5.5 -2.7 -3.1 71.3 69.3 45.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-176   LEU-177  9.5 9.6 -2.6 1.7 100.3 102.1 16.6
 LEU-177   ARG-178  6.0 6.0 5.9 -6.8 59.0 57.6 -41.2
 ARG-178   GLU-179  3.2 3.3 -3.6 -0.5 92.1 92.6 56.4
 GLU-179   GLY-180  1.1 1.1 -8.2 3.9 117.8 119.6 7.5
 GLY-180   LYS-181  3.5 3.4 -0.5 2.7 48.9 47.9 -18.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-183   GLU-184  8.1 7.9 -0.2 -4.9 128.8 132.3 -90.0
 GLU-184   GLU-185  7.6 7.5 4.2 -1.4 106.6 108.4 199.9
 GLU-185   VAL-186  6.2 6.1 -7.1 4.1 122.1 121.7 -97.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-232   PHE-233  9.0 9.0 4.2 -1.9 110.6 108.3 -77.7
 PHE-233   ILE-234  5.3 5.4 7.5 -14.4 124.6 128.4 92.6
 ILE-234   ARG-235  3.8 3.8 9.6 -4.9 69.0 68.5 -44.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-243   LEU-244  4.0 3.8 3.9 -0.3 71.4 69.4 90.0
 LEU-244   ILE-245  0.7 0.6 -5.8 6.0 130.7 130.4 99.3
 ILE-245   HIS-246  2.8 2.7 5.4 -11.5 96.8 94.8 13.4
 HIS-246   PRO-247  6.3 6.4 -9.0 4.6 40.0 46.5 204.8
 HIS-246   PRO-247  6.3 6.4 -9.0 4.6 40.0 46.5 204.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-246   PRO-247  6.3 6.4 -9.0 4.6 40.0 46.5 204.8
 HIS-246   PRO-247  6.3 6.4 -9.0 4.6 40.0 46.5 204.8
 PRO-247   ASN-248  8.9 9.1 1.9 -6.6 82.2 74.4 -83.8
 ASN-248   SER-249  11.0 11.3 5.2 -6.7 67.0 62.4 44.6
 SER-249   PHE-250  9.2 9.7 4.2 6.6 136.8 135.3 -130.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-252   THR-253  10.2 10.4 -12.7 5.8 37.8 36.5 225.5
 THR-253   ASN-254  8.9 9.1 0.6 -5.7 121.9 124.9 9.7
 ASN-254   SER-255  9.7 9.7 5.5 -1.7 49.1 47.3 -1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees