Dengue 4 Ns3 Full-Length Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-168   GLU-169  17.9 17.8 -8.4 -23.5 104.5 105.3 -10.9
 GLU-169   ARG-170  21.1 20.9 164.2 -33.9 49.8 46.7 158.1
 ASP-175   TYR-176  16.9 18.5 80.8 7.3 93.4 64.1 -137.5
 TYR-176   GLU-177  18.3 19.3 25.5 -150.7 61.1 54.1 249.4
 GLU-177   VAL-178  20.3 22.7 -65.6 13.7 82.8 145.1 -289.1
 VAL-178   ASP-179  22.7 22.3 -22.6 1.0 162.4 113.2 -49.2
 ASP-179   GLU-180  22.4 24.8 16.8 -7.7 65.4 45.2 6.4
 GLU-180   ASP-181  24.5 27.0 179.9 -9.2 40.6 17.2 321.7
 ASP-181   ILE-182  26.2 26.6 -83.4 21.8 143.3 111.7 -70.5
 ILE-182   PHE-183  23.3 22.8 -33.5 -2.5 133.2 120.8 -35.0

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees