Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-99   ILE-100  6.1 4.7 3.9 -49.2 153.6 144.6 112.5
 ILE-100   SER-101  6.9 6.6 25.0 28.6 75.8 69.7 40.8
 SER-101   ALA-102  10.6 9.8 -25.0 8.4 44.8 68.8 22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-127   ALA-128  14.1 13.2 12.4 -10.5 101.9 108.0 5.1
 ALA-128   ASP-129  10.3 9.6 156.6 13.6 150.2 146.5 527.6
 ASP-129   ILE-130  9.9 8.4 29.7 -43.5 151.8 78.7 44.7
 ILE-130   ASP-131  9.5 9.2 166.8 -2.4 145.2 153.4 -432.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-136   ASN-137  6.1 6.1 24.1 1.9 85.9 91.5 2.5
 ASN-137   TYR-138  2.8 2.5 -102.2 3.1 63.8 50.3 166.7
 TYR-138   GLU-139  1.0 2.5 46.2 -7.1 73.3 83.0 68.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees