Nickel-Binding Periplasmic Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-241
LEU-242
10.2
9.8
-16.7
6.6
31.5
37.3
39.6
LEU-242
SER-243
11.1
11.2
-26.8
12.2
58.3
45.7
43.4
SER-243
GLN-244
11.1
10.6
-7.3
-19.3
54.0
49.9
82.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-440
THR-441
8.4
7.5
-18.2
-17.3
104.5
103.9
51.0
THR-441
HIS-442
11.0
10.7
-3.0
26.9
63.8
49.0
-166.8
HIS-442
ASP-443
14.7
14.1
15.7
-17.8
86.0
88.6
71.5
ASP-443
GLU-444
16.6
15.8
-19.6
13.8
49.0
48.3
36.5
GLU-444
THR-445
17.3
16.4
-10.4
4.1
110.6
110.8
-42.1
THR-445
GLN-446
18.2
17.7
8.8
-4.7
71.7
62.4
85.3
GLN-446
ARG-447
14.8
14.5
11.4
-11.2
38.4
44.6
26.3
GLN-446
ARG-447
14.8
14.5
11.4
-11.2
38.4
44.6
26.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-446
ARG-447
14.8
14.5
11.4
-11.2
38.4
44.6
26.3
GLN-446
ARG-447
14.8
14.5
11.4
-11.2
38.4
44.6
26.3
ARG-447
GLN-448
13.1
12.7
13.5
0.2
65.1
63.1
31.3
GLN-448
ALA-449
15.3
15.2
-3.3
3.4
57.5
58.1
13.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-469
ILE-470
14.3
14.0
-10.2
6.6
19.4
18.7
65.0
ILE-470
SER-471
12.0
11.9
10.7
-10.0
103.0
109.5
-23.1
SER-471
MET-472
10.2
10.0
3.1
-32.4
111.4
119.2
55.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees