Small-Conductance Mechanosensitive Channel

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-84   ALA-85  10.9 10.8 -0.7 -0.1 121.6 121.0 -3.0
 ALA-85   LEU-86  13.3 13.2 -0.3 4.8 118.5 119.0 17.6
 LEU-86   GLY-87  11.2 11.2 0.3 5.3 132.6 135.5 -27.6
 GLY-87   ARG-88  10.7 10.9 -0.2 -1.1 75.1 79.3 -11.8
 ARG-88   VAL-89  14.4 14.7 -5.3 10.7 136.5 137.3 30.6
 VAL-89   GLY-90  15.5 15.4 10.2 -21.4 88.5 98.2 16.4
 GLY-90   VAL-91  14.0 14.3 -26.7 39.7 122.2 120.1 35.0
 VAL-91   GLN-92  10.6 11.2 2.3 -0.5 133.4 131.8 -8.5
 GLN-92   THR-93  8.3 9.3 0.3 1.6 74.7 71.8 10.5
 THR-93   ALA-94  5.0 5.6 4.1 -0.9 113.3 109.8 -8.3
 ALA-94   SER-95  3.7 5.2 -1.7 -2.7 121.3 123.1 -14.7
 SER-95   VAL-96  2.5 4.2 0.4 1.6 91.0 89.7 21.1
 VAL-96   ILE-97  1.2 0.5 0.3 1.3 156.4 154.2 -6.9
 ILE-97   ALA-98  1.3 0.5 0.4 -1.0 100.9 97.6 -9.3
 ALA-98   VAL-99  3.5 4.2 0.0 -1.5 119.8 122.9 2.7
 VAL-99   LEU-100  5.1 5.0 3.1 -1.9 113.9 112.0 0.1
 LEU-100   GLY-101  5.9 4.9 -1.7 2.4 32.3 35.4 -0.2
 GLY-101   ALA-102  6.2 5.7 -0.5 -1.2 98.0 101.4 -1.9
 ALA-102   ALA-103  9.0 8.8 -1.5 0.8 104.1 107.0 4.2
 ALA-103   GLY-104  10.6 9.9 2.4 -3.6 143.0 139.6 6.0
 GLY-104   LEU-105  11.0 10.2 -2.2 3.3 58.5 59.5 4.4
 LEU-105   ALA-106  12.2 11.8 0.9 -1.8 65.0 61.6 -4.1
 ALA-106   VAL-107  14.9 14.3 -0.1 -0.6 77.4 80.4 15.8
 VAL-107   GLY-108  16.1 15.3 2.8 -5.1 161.7 159.5 16.1
 GLY-108   LEU-109  16.0 15.4 -1.8 3.0 84.7 84.4 -6.4
 LEU-109   ALA-110  18.4 17.7 0.1 1.4 68.9 71.1 3.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees