Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-146   VAL-147  6.7 6.1 1.5 6.6 131.8 130.6 -5.3
 VAL-147   GLN-148  9.0 9.1 -7.7 -0.7 110.8 102.3 1.9
 GLN-148   VAL-149  9.7 9.7 0.1 -0.7 93.1 104.2 -1.1
 VAL-149   ILE-150  6.2 6.6 -1.5 -6.9 19.2 8.9 36.2
 ILE-150   CYS-151  6.2 6.4 4.9 -7.4 100.2 110.9 1.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   ALA-212  14.1 13.1 -9.0 8.1 98.8 110.7 26.9
 ALA-212   VAL-213  16.5 15.9 -7.5 -15.2 119.5 120.8 -40.2
 VAL-213   SER-214  14.5 14.1 -174.3 102.3 159.1 159.6 -473.6
 SER-214   ASP-215  16.6 12.3 -152.4 17.1 88.2 127.1 157.1
 ASP-215   GLU-216  17.7 15.8 145.3 -9.3 56.7 69.7 541.7
 GLU-216   ASP-217  21.2 17.3 -6.2 -76.7 166.0 131.9 -445.5
 ASP-217   GLY-218  19.8 14.8 76.3 -153.8 90.1 81.8 -63.1
 GLY-218   ASP-219  18.7 11.7 -10.0 -29.5 84.9 109.8 -0.9
 ASP-219   ARG-220  15.0 10.7 -175.0 88.4 36.3 35.0 554.0
 ARG-220   LEU-221  13.0 10.8 152.1 -72.8 79.0 112.4 -59.0
 LEU-221   SER-222  9.7 8.5 -17.3 -16.1 121.2 124.5 -71.8
 SER-222   GLN-223  9.8 7.7 -0.8 -6.8 54.3 56.2 35.0
 GLN-223   GLU-224  10.9 9.2 0.0 0.6 83.9 77.8 6.8
 GLU-224   GLU-225  7.9 6.7 1.7 1.0 129.0 133.1 -31.6
 GLU-225   LEU-226  5.6 4.0 -1.4 2.4 16.5 25.3 14.3
 LEU-226   VAL-227  7.7 6.8 1.5 0.1 114.1 115.5 -19.2
 VAL-227   ALA-228  8.1 7.7 2.1 -7.2 94.8 107.6 6.9
 ALA-228   MET-229  4.8 4.8 2.9 3.7 144.4 146.5 -21.0
 MET-229   ALA-230  3.2 3.1 -1.9 2.9 32.1 38.2 1.3
 ALA-230   MET-231  5.7 6.2 2.2 -1.5 98.8 102.7 13.1
 MET-231   LEU-232  6.4 7.0 -3.2 -2.4 74.6 60.9 16.5
 LEU-232   LEU-233  3.5 4.4 0.7 -5.7 169.0 164.4 38.5
 LEU-233   LEU-234  2.5 3.3 4.6 -4.6 124.3 124.8 -5.5
 LEU-234   ILE-235  6.1 6.9 4.1 1.8 89.1 104.8 -12.9
 ILE-235   ALA-236  7.4 8.1 -2.2 17.6 64.1 48.6 -67.0
 ALA-236   GLY-237  5.7 5.7 -14.2 35.5 5.8 25.2 -103.0
 GLY-237   HIS-238  4.6 5.6 -11.3 -11.7 51.7 64.0 45.4
 HIS-238   GLU-239  7.8 9.4 50.7 -65.8 110.1 100.7 51.6
 HIS-238   GLU-239  7.8 9.4 50.7 -65.8 110.1 100.7 51.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-238   GLU-239  7.8 9.4 50.7 -65.8 110.1 100.7 51.6
 HIS-238   GLU-239  7.8 9.4 50.7 -65.8 110.1 100.7 51.6
 GLU-239   THR-240  10.8 10.5 49.9 -65.9 114.9 108.5 60.8
 THR-240   THR-241  9.6 9.0 -20.7 12.0 15.8 8.0 27.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees