Tyrosine Phenol-Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-12   VAL-13  12.6 12.8 -3.9 13.8 46.3 47.3 -49.9
 VAL-13   GLU-14  10.9 11.1 -4.1 18.4 113.8 112.4 26.3
 GLU-14   THR-15  8.4 8.1 -14.6 -9.3 56.6 72.7 56.8
 THR-15   VAL-16  10.5 10.2 -3.6 -9.3 44.8 57.1 34.8
 VAL-16   SER-17  10.1 10.7 6.7 74.3 102.0 90.2 -91.8
 SER-17   MET-18  12.7 13.7 170.4 177.6 126.7 136.8 56.6
 MET-18   ILE-19  13.8 15.0 -114.0 49.3 110.6 74.6 -23.8
 ILE-19   PRO-20  16.4 16.8 -10.2 -16.7 30.2 11.0 145.9
 PRO-20   ARG-21  19.1 18.9 6.2 5.9 125.6 120.4 -62.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-45   ASP-46  5.8 5.9 -3.9 -6.5 94.6 95.4 34.0
 ASP-46   LEU-47  3.3 3.3 5.7 -3.1 60.6 59.6 23.6
 LEU-47   LEU-48  1.8 1.6 0.1 -3.4 85.6 85.5 -21.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-345   PHE-346  3.8 3.5 3.0 3.1 91.8 92.4 56.9
 PHE-346   LEU-347  5.4 4.9 15.9 -14.2 142.4 140.9 -46.2
 LEU-347   ASP-348  4.8 4.6 6.2 -9.9 115.5 115.5 36.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-404   LEU-405  5.9 5.7 -0.5 -1.2 58.2 56.4 32.6
 LEU-405   THR-406  2.3 2.1 -0.3 0.2 63.7 64.6 12.6
 THR-406   ILE-407  3.8 3.6 -0.8 0.4 52.0 54.1 20.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-419   VAL-420  10.5 10.7 -3.2 2.6 70.3 65.9 -2.2
 VAL-420   ALA-421  7.0 7.2 -2.8 -8.5 5.0 5.6 63.6
 ALA-421   ASP-422  7.0 7.5 -9.3 4.8 65.9 67.9 11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees