6-Phosphogluconate Dehydrogenase, Decarboxylating

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-97   ILE-98  9.0 9.3 -6.5 -1.2 59.7 61.2 56.5
 ILE-98   ASP-99  6.3 6.5 -5.6 8.5 90.9 93.3 -2.9
 ASP-99   GLY-100  4.6 4.7 -3.2 -1.3 38.8 39.7 55.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-110   ARG-111  1.8 1.6 1.2 0.7 80.5 76.3 18.1
 ARG-111   ASN-112  1.7 1.7 0.3 -0.3 80.7 77.6 9.9
 ASN-112   ARG-113  4.0 4.0 1.3 5.2 148.5 147.6 -41.1
 ARG-113   GLU-114  5.0 5.1 -4.6 -0.4 55.7 63.8 38.1
 GLU-114   LEU-115  4.4 4.9 -2.5 -2.8 111.6 118.4 2.2
 LEU-115   SER-116  7.1 7.3 2.9 -8.0 92.6 84.8 25.0
 SER-116   ALA-117  9.0 9.2 2.0 1.2 153.5 151.3 -27.2
 ALA-117   GLU-118  9.4 9.8 -8.9 13.2 85.0 83.1 12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-121   PHE-122  10.0 11.1 -31.4 23.3 70.4 70.7 99.3
 PHE-122   ILE-123  6.4 7.4 18.9 -17.5 132.5 131.0 52.8
 ILE-123   GLY-124  5.0 5.3 5.6 -7.8 100.5 92.5 2.2
 GLY-124   THR-125  1.2 1.5 -6.1 0.6 22.1 27.6 40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-126   VAL-127  2.6 2.7 -1.2 -1.3 151.3 151.1 -16.2
 VAL-127   SER-128  2.9 2.9 4.8 -8.7 60.4 62.0 -21.7
 SER-128   GLY-129  5.2 5.3 -5.7 20.6 159.2 161.9 138.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-138   SER-139  1.8 1.9 1.1 6.7 77.1 75.2 43.0
 SER-139   ILE-140  2.4 2.4 6.3 -9.8 21.3 23.7 -33.8
 ILE-140   MET-141  2.0 1.9 -3.3 -0.8 124.8 123.6 -54.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-143   GLY-144  6.2 6.1 8.4 -6.8 135.5 134.5 -27.8
 GLY-144   GLN-145  7.3 7.4 -8.9 -4.2 85.8 85.7 17.8
 GLN-145   LYS-146  10.8 10.9 12.2 1.5 25.2 25.4 135.5
 LYS-146   GLU-147  13.1 13.1 6.1 5.6 73.8 82.7 56.0
 GLU-147   ALA-148  15.1 14.8 -5.5 2.0 105.5 105.4 5.3
 ALA-148   TYR-149  12.5 11.7 -2.7 -2.9 156.0 162.6 -36.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-152   ALA-153  11.9 11.3 0.6 1.0 147.9 147.2 5.5
 ALA-153   PRO-154  11.5 11.1 0.4 -2.1 150.1 148.9 26.0
 PRO-154   ILE-155  13.4 13.0 -6.1 -3.6 73.9 73.4 57.2
 ILE-155   LEU-156  11.5 11.2 7.3 1.8 102.3 99.0 -47.1
 LEU-156   THR-157  7.9 7.6 1.7 1.2 148.7 153.4 -72.3
 THR-157   LYS-158  8.9 8.6 -5.1 7.2 38.1 42.4 8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-159   ALA-160  6.9 6.8 1.7 -6.1 97.6 97.7 -8.5
 ALA-160   ALA-161  3.9 3.7 2.1 0.5 159.1 162.0 -7.9
 ALA-161   VAL-162  1.9 1.8 1.8 -9.4 105.3 102.3 104.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees