Autolysin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-259   GLY-260  7.6 7.7 -6.2 -13.9 10.1 15.7 134.7
 GLY-260   TRP-261  6.4 6.4 -9.8 15.0 60.1 53.5 -43.7
 TRP-261   VAL-262  5.4 5.5 -9.2 7.6 95.8 87.7 -0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-268   TYR-269  5.2 4.8 -6.6 9.2 32.3 34.6 -23.2
 TYR-269   TYR-270  3.8 3.7 0.2 -2.1 104.5 110.3 26.9
 TYR-270   LEU-271  1.6 1.6 -24.2 21.1 3.6 0.7 17.1
 LEU-271   ASP-272  3.0 3.0 25.6 -18.4 106.9 107.3 6.8
 ASP-272   ALA-273  4.2 3.9 17.4 3.1 96.7 89.3 -16.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-277   MET-278  1.6 1.7 -6.9 -2.2 23.9 21.5 47.9
 MET-278   VAL-279  2.2 2.6 2.6 -2.5 94.2 96.5 16.9
 VAL-279   SER-280  2.9 2.9 -4.4 -4.3 58.0 57.1 39.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees