Hypothetical Oxidoreductase Yqhd

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-173   VAL-174  7.1 7.2 1.1 -5.5 43.0 46.6 -0.7
 VAL-174   LEU-175  6.8 6.7 1.9 1.9 69.1 68.2 39.7
 LEU-175   ASP-176  3.1 3.1 3.7 -0.9 37.8 38.4 22.7
 ALA-173   VAL-174  5.6 5.6 1.1 -5.5 97.0 100.2 39.2
 VAL-174   LEU-175  6.8 6.6 1.9 1.9 58.4 58.3 53.1
 ALA-173   VAL-174  2.2 2.1 1.1 -5.5 66.3 68.9 9.1
 VAL-174   LEU-175  2.2 2.7 1.9 1.9 62.8 58.7 28.9
 LEU-175   ASP-176  2.9 3.2 3.7 -0.9 60.2 60.8 10.9
 ALA-173   VAL-174  7.1 7.2 1.1 -5.5 43.0 46.6 -0.7
 VAL-174   LEU-175  6.8 6.7 1.9 1.9 69.1 68.2 39.7
 LEU-175   ASP-176  3.1 3.1 3.7 -0.9 37.8 38.4 22.7
 PHE-172   ALA-173  3.8 3.8 3.2 -1.1 30.1 29.6 52.5
 ALA-173   VAL-174  5.6 5.6 1.1 -5.5 97.0 100.2 39.2
 VAL-174   LEU-175  6.8 6.6 1.9 1.9 58.4 58.3 53.1
 PHE-172   ALA-173  4.5 4.4 3.2 -1.1 32.8 31.7 35.8
 ALA-173   VAL-174  2.2 2.1 1.1 -5.5 66.3 68.9 9.1
 VAL-174   LEU-175  2.2 2.7 1.9 1.9 62.8 58.7 28.9
 LEU-175   ASP-176  2.9 3.2 3.7 -0.9 60.2 60.8 10.9
 ALA-173   VAL-174  7.1 7.2 1.1 -5.5 43.0 46.6 -0.7
 VAL-174   LEU-175  6.8 6.7 1.9 1.9 69.1 68.2 39.7
 LEU-175   ASP-176  3.1 3.1 3.7 -0.9 37.8 38.4 22.7
 PHE-172   ALA-173  3.8 3.8 3.2 -1.1 30.1 29.6 52.5
 ALA-173   VAL-174  5.6 5.6 1.1 -5.5 97.0 100.2 39.2
 VAL-174   LEU-175  6.8 6.6 1.9 1.9 58.4 58.3 53.1
 PHE-172   ALA-173  4.5 4.4 3.2 -1.1 32.8 31.7 35.8
 ALA-173   VAL-174  2.2 2.1 1.1 -5.5 66.3 68.9 9.1
 VAL-174   LEU-175  2.2 2.7 1.9 1.9 62.8 58.7 28.9
 LEU-175   ASP-176  2.9 3.2 3.7 -0.9 60.2 60.8 10.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees