Carbamoyl Phosphate Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-679   HIS-680  9.9 9.8 6.5 -7.3 148.6 148.1 50.2
 HIS-680   ALA-681  11.6 11.8 6.5 -18.3 84.7 83.4 -55.2
 ALA-681   VAL-682  14.3 14.5 -7.8 15.1 99.0 103.5 6.5
 VAL-682   GLU-683  12.2 12.5 5.3 1.8 148.8 139.5 -58.9
 GLU-683   ARG-684  10.7 11.1 -16.7 20.3 54.3 62.1 66.9
 ARG-684   LEU-685  13.9 14.4 -18.1 9.0 105.9 109.6 -16.7
 LEU-685   LYS-686  15.6 16.1 -8.3 -5.4 87.4 93.0 -3.7
 LYS-686   LEU-687  13.6 13.9 25.8 -19.7 25.7 24.2 30.3
 LEU-687   LYS-688  12.9 13.1 2.8 12.4 79.5 79.9 11.1
 LYS-688   GLN-689  10.2 10.4 -13.5 13.5 134.4 120.3 -22.5
 GLN-689   PRO-690  7.2 7.2 -19.9 3.4 87.6 93.3 -20.7
 PRO-690   ALA-691  4.0 3.9 -38.4 27.9 37.9 48.8 51.6
 ALA-691   ASN-692  1.5 1.4 3.7 17.8 71.4 72.2 25.0
 ASN-692   ALA-693  2.3 2.4 -12.5 3.2 36.3 42.3 42.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-714   ARG-715  8.1 7.8 -11.4 22.5 73.9 66.3 -10.8
 ARG-715   PRO-716  9.2 9.3 25.5 -23.2 60.9 59.4 -10.1
 ALA-724   MET-725  13.4 12.1 150.1 -69.1 63.7 54.8 185.0
 MET-725   GLU-726  9.7 8.5 -14.3 28.3 65.6 70.0 -40.7
 GLU-726   ILE-727  8.1 7.6 21.8 -31.9 56.2 57.7 13.7
 ILE-727   VAL-728  6.1 6.1 3.8 -9.2 78.0 84.3 -26.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-753   HIS-754  2.8 2.5 19.9 -9.7 111.6 109.7 0.0
 HIS-754   PHE-755  1.8 2.1 6.2 -22.2 148.1 157.4 60.1
 PHE-755   LEU-756  2.3 2.6 -15.7 18.1 90.8 84.3 4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees