D-Maltodextrin Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-108   ALA-109  9.5 9.4 -11.7 31.7 132.8 131.1 28.1
 ALA-109   VAL-110  6.1 6.0 9.6 -24.5 116.1 115.5 5.9
 VAL-110   GLU-111  2.4 2.3 24.5 -31.5 61.6 65.4 12.7
 GLU-111   ALA-112  3.2 2.2 11.5 -22.4 98.1 110.9 19.9
 ALA-112   LEU-113  4.9 4.8 20.5 1.0 53.7 48.5 28.5
 LEU-113   SER-114  8.5 8.4 6.1 -10.4 43.3 45.2 -2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-257   PHE-258  9.5 9.5 2.7 7.2 43.6 55.8 31.7
 PHE-258   VAL-259  7.1 6.7 15.6 -17.2 124.4 125.2 6.2
 VAL-259   GLY-260  3.6 3.2 -8.3 6.9 123.1 116.5 9.1
 GLY-260   VAL-261  2.8 2.1 -15.9 -6.1 60.3 64.4 47.8
 VAL-261   LEU-262  3.6 3.4 6.6 -7.9 81.1 79.7 5.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-310   LEU-311  9.3 9.3 -22.3 14.5 86.9 91.1 6.5
 LEU-311   ALA-312  6.1 6.0 -3.2 107.1 100.3 101.0 159.8
 ALA-312   LYS-313  4.3 5.2 -117.0 -20.1 107.2 159.2 -122.2
 LYS-313   ASP-314  4.6 4.7 13.8 -17.8 76.8 84.8 15.0
 ASP-314   PRO-315  1.0 1.0 -4.9 3.4 69.8 59.1 3.1
 PRO-315   ARG-316  3.0 3.9 1.9 -5.2 142.5 145.5 12.5
 ARG-316   ILE-317  3.6 3.7 2.6 -1.4 146.5 141.7 -8.9
 ILE-317   ALA-318  0.6 0.8 3.3 2.1 100.1 105.9 5.7
 ALA-318   ALA-319  4.1 4.5 -3.3 3.2 59.3 53.3 -5.3
 ALA-319   THR-320  5.9 6.0 -8.0 1.1 16.7 20.7 13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-325   LYS-326  8.8 8.6 6.3 -5.4 65.7 66.8 -5.5
 LYS-326   GLY-327  11.1 10.9 2.2 8.3 34.0 41.7 27.3
 GLY-327   GLU-328  9.1 8.9 -13.3 33.3 139.3 157.9 63.7
 GLU-328   ILE-329  7.5 7.9 -15.8 6.8 102.8 102.4 -26.4
 ILE-329   MET-330  4.0 4.5 -8.3 10.1 151.4 137.4 -0.6
 MET-330   PRO-331  3.5 3.4 -25.1 -2.3 136.2 147.5 -26.3
 PRO-331   ASN-332  2.5 2.9 -14.1 17.6 95.2 107.6 31.8
 ASN-332   ILE-333  1.5 0.9 1.5 -34.0 9.9 11.9 -84.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees